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Updated: Apr 28, 2026

Purification of Ubiquitinated p53 Proteins from Mammalian Cells
Published on: March 21, 2022
Deubiquitinating enzyme regulation of the p53 pathway: A lesson from Otub1
1Xiao-Xin Sun, Mu-Shui Dai, Department of Molecular and Medical Genetics, School of Medicine, and the OHSU Knight Cancer Institute, Oregon Health and Science University, Portland, OR 97239, United States.
Abstract:
Deubiquitination has emerged as an important mechanism of p53 regulation. A number of deubiquitinating enzymes (DUBs) from the ubiquitin-specific protease family have been shown to regulate the p53-MDM2-MDMX networks. We recently reported that Otub1, a DUB from the OTU-domain containing protease family, is a novel p53 regulator. Interestingly, Otub1 abrogates p53 ubiquitination and stabilizes and activates p53 in cells independently of its deubiquitinating enzyme activity. Instead, it does so by inhibiting the MDM2 cognate ubiquitin-conjugating enzyme (E2) UbcH5. Otub1 also regulates other biological signaling through this non-canonical mechanism, suppression of E2, including the inhibition of DNA-damage-induced chromatin ubiquitination. Thus, Otub1 evolves as a unique DUB that mainly suppresses E2 to regulate substrates. Here we review the current progress made towards the understanding of the complex regulation of the p53 tumor suppressor pathway by DUBs, the biological function of Otub1 including its positive regulation of p53, and the mechanistic insights into how Otub1 suppresses E2.
Insights
Otub1, a deubiquitinating enzyme (DUB), stabilizes and activates the p53 tumor suppressor. It achieves this by non-canonically inhibiting ubiquitin-conjugating enzyme UbcH5, impacting p53 regulation and DNA damage responses.
Area of Science:
- Biochemistry
- Molecular Biology
- Cancer Research
Background:
- Deubiquitination is a key regulator of p53 stability and activity.
- Deubiquitinating enzymes (DUBs), particularly ubiquitin-specific proteases, influence the p53-MDM2-MDMX pathway.
- Otub1, an OTU-domain DUB, has been identified as a novel regulator of p53.
Purpose of the Study:
- To review the regulation of the p53 tumor suppressor pathway by DUBs.
- To elucidate the biological function of Otub1, focusing on its positive regulation of p53.
- To provide mechanistic insights into how Otub1 suppresses E2 enzymes.
Main Methods:
- Review of existing literature on DUBs and p53 regulation.
- Analysis of Otub1's role in p53 ubiquitination and stabilization.
- Investigation of Otub1's non-canonical mechanism involving inhibition of UbcH5.
- Examination of Otub1's impact on DNA-damage-induced chromatin ubiquitination.
Main Results:
- Otub1 abrogates p53 ubiquitination, leading to p53 stabilization and activation.
- Otub1 functions independently of its catalytic deubiquitinating activity.
- Otub1 inhibits the E2 enzyme UbcH5, a non-canonical mechanism of action.
- This E2 suppression mechanism also regulates other signaling pathways, including DNA-damage responses.
Conclusions:
- Otub1 is a unique DUB that primarily regulates substrates by suppressing E2 enzymes.
- Otub1 plays a significant role in the p53 tumor suppressor pathway through non-canonical mechanisms.
- Understanding Otub1's function offers insights into novel therapeutic strategies for cancer.
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