Related Experiment Video
Updated: Apr 28, 2026

Noninvasive Sampling of Mucosal Lining Fluid for the Quantification of In Vivo Upper Airway Immune-mediator Levels
Published on: August 7, 2017
Quantity and diversity of environmental microbial exposure and development of asthma: a birth cohort study
A M Karvonen1, A Hyvärinen, H Rintala
1Department of Environmental Health, National Institute for Health and Welfare, Kuopio, Finland.
Insights
Early-life microbial exposure, measured by a combined score, predicts asthma risk better than individual markers. Higher microbial quantity showed an inverted-U relationship with asthma incidence in children.
Area of Science:
- Environmental microbiology
- Pediatric allergy and immunology
- Epidemiology
Background:
- Early-life exposure to environmental microbes is linked to allergy development.
- Characterizing microbial exposure is crucial for predicting respiratory symptoms and allergies.
Purpose of the Study:
- To identify improved methods for assessing microbial exposure as a predictor of childhood allergies and respiratory issues.
- To evaluate the association between microbial exposure markers and health outcomes in a birth cohort.
Main Methods:
- A birth cohort of 410 children was followed until age 6.
- Dust samples analyzed for microbial markers (endotoxin, muramic acid, ergosterol, qPCRs) at 2 months.
- Asthma, wheezing, cough, atopic dermatitis, and specific IgEs assessed via questionnaires and serology.
Main Results:
- A composite microbial exposure score (fungi, Gram-positive, Gram-negative bacteria) showed an inverted-U association with asthma incidence (P < 0.001).
- Highest asthma risk was observed at medium microbial exposure levels, lowest at the highest levels.
- Microbial diversity score was inversely associated with wheezing and associated with allergen sensitization.
Conclusions:
- A score reflecting total microbial quantity is a better predictor of asthma than individual markers.
- Microbial diversity and quantity are important factors in asthma development.
- Further research is needed for better indicators of microbial exposure quantity and diversity.
Background:
Early-life exposure to environmental microbial agents may be associated with the development of allergies. The aim of the study was to identify better ways to characterize microbial exposure as a predictor of respiratory symptoms and allergies.
Methods:
A birth cohort of 410 children was followed up until 6 years of age. Bacterial endotoxin, 3-hydroxy fatty acids, N-acetyl-muramic acid, fungal extracellular polysaccharides (EPS) from Penicillium and Aspergillus spp., β-D-glucan, ergosterol, and bacterial or fungal quantitative polymerase chain reactions (qPCRs) were analyzed from dust samples collected at 2 months of age. Asthma, wheezing, cough, and atopic dermatitis were assessed using repeated questionnaires. Specific IgEs were determined at the age of 1 and 6 years.
Results:
Only few associations were found between single microbial markers and the studied outcomes. In contrast, a score for the total quantity of microbial exposure, that is, sum of indicators for fungi (ergosterol), Gram-positive (muramic acid) bacteria, and Gram-negative (endotoxin) bacteria, was significantly (inverted-U shape) associated with asthma incidence (P < 0.001): the highest risk was found at medium levels (adjusted odds ratio (aOR) 2.24, 95% confidence interval (95% CI) 0.87-5.75 for 3rd quintile) and the lowest risk at the highest level (aOR 0.34, 95% CI 0.09-1.36 for 5th quintile). The microbial diversity score, that is, sum of detected qPCRs, was inversely associated with risk of wheezing and was significantly (inverted-U shape) associated with sensitization to inhalant allergens.
Conclusion:
Score for quantity of microbial exposure predicted asthma better than single microbial markers independently of microbial diversity and amount of dust. Better indicators of total quantity and diversity of microbial exposure are needed in studies on the development of asthma.
Related Concept Videos
Asthma I: Introduction
Asthma-I: Introduction
Development of Human Microbiota
Microbiota of the Respiratory Tract
Development of the Oral Microbiota
Asthma-II: Pathophysiology and Classification
Additionally, environmental and genetic factors play crucial roles in determining an individual's susceptibility to asthma and the severity of their condition.
Critical processes in asthma pathophysiology include:

