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Prediction and Validation of Gene Regulatory Elements Activated During Retinoic Acid Induced Embryonic Stem Cell Differentiation
Published on: June 21, 2016
Coactivator recruitment of AhR/ARNT1
Alexander Endler1, Li Chen2, Futoshi Shibasaki3
1Department of Molecular Medical Research, Tokyo Metropolitan Institute of Medical Science, 2-1-6 Kamikitazawa, Setagaya-ku, Tokyo 156-8506, Japan. alexanderendler@msn.com.
Abstract:
A common feature of nuclear receptors (NRs) is the transformation of external cell signals into specific transcriptions of the signal molecule. Signal molecules function as ligands for NRs and, after their uptake, activated NRs form homo- or heterodimers at promoter recognition sequences of the specific genes in the nucleus. Another common feature of NRs is their dependence on coactivators, which bridge the basic transcriptional machinery and other cofactors to the target genes, in order to initiate transcription and to unwind histone-bound DNA for exposing additional promoter recognition sites via their histone acetyltransferase (HAT) function. In this review, we focus on our recent findings related to the recruitment of steroid receptor coactivator 1 (SRC1/NCoA1) by the estrogen receptor-α (ERα) and by the arylhydrocarbon receptor/arylhydrocarbon receptor nuclear translocator 1 (AhR/ARNT1) complex. We also describe the extension of our previously published findings regarding the binding between ARNT1.1 exon16 and SRC1e exon 21, via in silico analyses of androgen receptor (AR) NH2-carboxyl-terminal interactions, the results of which were verified by in vitro experiments. Based on these data, we suggest a newly derived tentative binding site of nuclear coactivator 2/glucocorticoid receptor interacting protein-1/transcriptional intermediary factor 2 (NCOA-2/ GRIP-1/TIF-2) for ARNT1.1 exon 16. Furthermore, results obtained by immunoprecipitation have revealed a second leucine-rich binding site for hARNT1.1 exon 16 in SRC1e exon 21 (LSSTDLL). Finally, we discuss the role of 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) as an endocrine disruptor for estrogen related transcription.
Insights
Nuclear receptors (NRs) transform cell signals into gene transcription, often recruiting coactivators like SRC1. This review details SRC1 recruitment by ERα and AhR/ARNT1, and identifies new binding sites for coactivators, including NCOA-2/GRIP-1/TIF-2.
Area of Science:
- Molecular Biology
- Endocrinology
- Gene Regulation
Background:
- Nuclear receptors (NRs) mediate cellular responses to external signals by regulating gene transcription.
- NRs require coactivators to initiate transcription and modify chromatin structure.
- Steroid receptor coactivator 1 (SRC1) is a key coactivator involved in NR-mediated transcription.
Purpose of the Study:
- To review recent findings on SRC1 recruitment by estrogen receptor-α (ERα) and the arylhydrocarbon receptor/arylhydrocarbon receptor nuclear translocator 1 (AhR/ARNT1) complex.
- To investigate ARNT1.1 exon 16 and SRC1e exon 21 interactions, including novel binding sites.
- To discuss the endocrine-disrupting effects of 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) on estrogen-related transcription.
Main Methods:
- In silico analyses of androgen receptor (AR) NH2-carboxyl-terminal interactions.
- In vitro experimental verification of binding interactions.
- Immunoprecipitation assays to identify protein binding sites.
Main Results:
- Detailed findings on SRC1 recruitment by ERα and AhR/ARNT1.
- Identification of a tentative binding site for NCOA-2/GRIP-1/TIF-2 on ARNT1.1 exon 16.
- Discovery of a second leucine-rich binding site (LSSTDLL) for hARNT1.1 exon 16 in SRC1e exon 21.
Conclusions:
- SRC1 plays a crucial role in ERα and AhR/ARNT1-mediated transcription.
- Novel binding interactions between NRs, coactivators, and ARNT1 have been elucidated.
- TCDD acts as an endocrine disruptor affecting estrogen-related gene transcription.
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