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Published on: November 15, 2017
Development of multiplex loop-mediated isothermal amplification assays to detect medically important yeasts in dairy
Kohei Kasahara1, Hiroshi Ishikawa, Sumie Sato
1Yakult Central Institute for Microbiological Research, Kunitachi, Tokyo, Japan.
Abstract:
Rapid detection of yeast contamination is important in the food industry. We have developed loop-mediated isothermal amplification (LAMP) assays to detect the emerging opportunistic pathogenic yeasts: Candida albicans, Candida glabrata, Candida tropicalis, the Candida parapsilosis group, Trichosporon asahii, and Trichosporon mucoides. These yeasts may cause deep-seated candidiasis or trichosporonosis. Four LAMP primer sets specific for Candida were designed to target the internal transcribed spacer 2 (ITS2) region between the 5.8S and 26S rRNA genes, and two LAMP primer sets specific for Trichosporon were designed to target the intergenic spacer 1 (IGS1) region between the 26S and 5S rRNA genes. The LAMP assays could detect these yeasts in a range between 10(0) and 10(3) cells mL(-1) in a contaminated dairy product within 1 h. We also developed multiplex LAMP assays to detect these Candida or Trichosporon species in a single reaction. Multiplex LAMP assays can detect contamination if at least one of the target species is present; they are more time- and cost-efficient than conventional methods and could detect target yeasts with sensitivity close to that of the LAMP assays. Multiplex LAMP assays established in this study can be used as a primary screening method for yeast contamination in food products.
Insights
Rapid loop-mediated isothermal amplification (LAMP) assays detect common pathogenic yeasts like Candida and Trichosporon in food. These quick, cost-effective methods offer sensitive yeast contamination screening within an hour.
Area of Science:
- Microbiology
- Food Science
- Molecular Biology
Background:
- Yeast contamination poses a significant risk in the food industry.
- Emerging opportunistic pathogenic yeasts such as Candida and Trichosporon species can cause serious infections.
Purpose of the Study:
- To develop rapid and sensitive loop-mediated isothermal amplification (LAMP) assays for detecting specific pathogenic yeasts.
- To create multiplex LAMP assays for simultaneous detection of multiple yeast species in food products.
Main Methods:
- Designed species-specific LAMP primer sets targeting the ITS2 region for Candida and IGS1 region for Trichosporon.
- Validated LAMP assays for sensitivity, detecting yeasts from 10^0 to 10^3 cells/mL in contaminated dairy products within 1 hour.
- Developed and tested multiplex LAMP assays for simultaneous detection of target Candida or Trichosporon species.
Main Results:
- LAMP assays demonstrated high sensitivity and rapid detection capabilities for target yeasts.
- Multiplex LAMP assays effectively detected the presence of at least one target species.
- The developed assays were time- and cost-efficient compared to conventional methods.
Conclusions:
- Loop-mediated isothermal amplification (LAMP) assays provide a rapid and reliable method for detecting pathogenic yeast contamination in food.
- Multiplex LAMP assays serve as an efficient primary screening tool for yeast contamination in food products.
- These assays contribute to enhanced food safety by enabling quick identification of potential health hazards.
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