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Updated: Apr 27, 2026

Three Differential Expression Analysis Methods for RNA Sequencing: limma, EdgeR, DESeq2
Published on: September 18, 2021
From differential gene expression to differential gene function and back
Moitreyee Chatterjee-Kishore1, Maryann Z Whitley1
1Department of Genomics, Wyeth Research, 35 CambridgePark Drive, Cambridge, MA 01240, USA.
Abstract:
Following the decoding of several plant and animal genomes, the identification of all corresponding transcripts and proteins and understanding how their expression corresponds to physiological and pathological states is the obvious next step. Nucleic acid quantification methods have become increasingly high-throughput and relatively low-cost, and moving ahead, combinations of technologies monitoring differential gene expression and those defining differential cellular function will yield maximum benefit in furthering biology and for drug target identification and validation.:
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