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High-definition Fourier Transform Infrared FT-IR Spectroscopic Imaging of Human Tissue Sections towards Improving Pathology
Published on: January 21, 2015
Using Fourier transform IR spectroscopy to analyze biological materials.
Matthew J Baker1, Júlio Trevisan2, Paul Bassan3
11] Centre for Materials Science, Division of Chemistry, University of Central Lancashire, Preston, UK. [2] Present address: WestCHEM, Department of Pure and Applied Chemistry, University of Strathclyde, Glasgow, UK.
Infrared (IR) spectroscopy offers label-free biochemical analysis for biological samples. This study standardizes IR spectral data acquisition and analysis for consistent cell and tissue imaging for disease diagnosis.
Area of Science:
- Biomedical Engineering
- Spectroscopy
- Biochemistry
Background:
- Infrared (IR) spectroscopy provides label-free, nonperturbative biochemical information and imaging for biological analyses.
- IR imaging visualizes tissue and cell architecture using spectral data and computational algorithms.
- Objective assessment of sample health status is possible through fingerprint spectra analysis.
Purpose of the Study:
- To standardize methods and procedures for IR spectroscopy in biological analyses.
- To establish a multistage approach for IR methodology applicable to cell biology and clinical settings.
- To provide a protocol for collecting and analyzing IR spectra and images from diverse biological samples.
Main Methods:
- Detailed protocol for collecting IR spectra and images from various biological samples (fixed cytology, tissue sections, live cells, biofluids).
- Assessment of instrumental options, sample preparation, sampling modes, and spectral data acquisition advances.
- Data processing pipeline including quality control, spectral pre-processing, feature extraction, and supervised/unsupervised classification.
Main Results:
- A standardized multistage approach for IR spectral data acquisition and analysis is presented.
- The protocol facilitates the application of IR spectroscopy for cell biological questions and clinical disease screening/diagnosis.
- Example results demonstrate the utility of IR spectra combined with multivariate data processing.
Conclusions:
- Standardized IR spectroscopy methods enable objective biochemical analysis and imaging of biological samples.
- The proposed methodology supports consistent application in research and clinical settings for diagnosis and functionality assessment.
- IR spectroscopy, with standardized processing, offers a rapid and effective tool for biological sample analysis.
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