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Updated: Apr 27, 2026

Analysis of Retinoic Acid-induced Neural Differentiation of Mouse Embryonic Stem Cells in Two and Three-dimensional Embryoid Bodies
Published on: April 22, 2017
Distinguishing between cancer cell differentiation and resistance induced by all-trans retinoic acid using
Song-Mei Liu1, Weiping Chen2, Jin Wang3
1Center for Gene Diagnosis, Zhongnan Hospital of Wuhan University, Wuhan, Hubei 430071, China.
Abstract:
All-trans retinoic acid (ATRA) induces differentiation in various cell types and has been investigated extensively for its effective use in cancer prevention and treatment. Relapsed or refractory disease that is resistant to ATRA is a clinically significant problem. To identify the molecular mechanism that bridges ATRA differentiation and resistance in cancer, we selected the multidrug-resistant leukemia cell line HL-60[R] by exposing it to ATRA, followed by sequential increases of one-half log concentration. A cytotoxicity analysis revealed that HL-60[R] cells were highly resistant to ATRA, doxorubicin, and etoposide. A comparative genome hybridization analysis of HL-60[R] cells identified gains of 4q34, 9q12, and 19q13 and a loss of Yq12 compared with in the parental HL-60 cell line. Transcriptional profiles and functional pathway analyses further demonstrated that 7 genes (FEN1, RFC5, EXO1, XRCC5, PARP1, POLR2F, and GTF2H3) that were relatively up-regulated in HL-60[R] cells and repressed in cells with ATRA-induced differentiation were related to mismatch repair in eukaryotes, DNA double-strand break repair, and nucleotide excision repair pathways. Our results suggest that transcriptional time series profiles and a functional pathway analysis of drug resistance and ATRA-induced cell differentiation will be useful for identifying promyelocytic leukemia patients who are eligible for new therapeutic strategies.
Insights
All-trans retinoic acid (ATRA) resistance in leukemia involves specific gene up-regulation. Understanding these DNA repair pathways can guide new cancer treatment strategies.
Area of Science:
- Molecular Biology
- Cancer Research
- Genetics
Background:
- All-trans retinoic acid (ATRA) is effective for cancer treatment but resistance is a significant clinical challenge.
- Understanding the molecular mechanisms of ATRA resistance is crucial for developing new therapeutic strategies.
Purpose of the Study:
- To identify the molecular mechanisms underlying ATRA resistance in cancer.
- To investigate the relationship between ATRA-induced differentiation and drug resistance.
Main Methods:
- Developed a multidrug-resistant leukemia cell line (HL-60[R]) through sequential ATRA exposure.
- Performed cytotoxicity analysis, comparative genome hybridization, and transcriptional profiling.
- Conducted functional pathway analysis on identified genes.
Main Results:
- HL-60[R] cells exhibited resistance to ATRA, doxorubicin, and etoposide.
- Identified chromosomal gains (4q34, 9q12, 19q13) and a loss (Yq12) in HL-60[R] cells.
- Found up-regulation of 7 genes (FEN1, RFC5, EXO1, XRCC5, PARP1, POLR2F, GTF2H3) involved in DNA repair pathways (mismatch repair, DNA double-strand break repair, nucleotide excision repair).
Conclusions:
- Transcriptional profiles and pathway analyses reveal key genes and pathways associated with ATRA resistance.
- These findings can aid in identifying patients eligible for novel therapeutic strategies in promyelocytic leukemia.
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