The RimL transacetylase provides resistance to translation inhibitor microcin C

Teymur Kazakov1, Konstantin Kuznedelov1, Ekaterina Semenova1

  • 1Waksman Institute, Piscataway, New Jersey, USA.

Insights

Escherichia coli RimL acetyltransferase provides resistance to microcin C (McC) and toxic aminoacyl adenylates by acetylating processed McC. This study identifies RimL and YhhY proteins as key players in bacterial defense against harmful nucleotides.

Area of Science:

  • Microbiology
  • Molecular Biology
  • Biochemistry

Background:

  • Microcin C (McC) is a peptide-nucleotide antibiotic produced by Escherichia coli.
  • Processed McC releases a toxic aspartyl-adenylate analog inhibiting aspartyl-tRNA synthetase.
  • The mccE gene product acetylates processed McC, conferring nontoxicity.

Purpose of the Study:

  • To investigate the role of E. coli acetyltransferases, specifically RimL, in resistance to McC and related toxic compounds.
  • To identify novel bacterial defense mechanisms against aminoacyl adenylates.

Main Methods:

  • Comparative analysis of acetyltransferase activity (RimI, RimJ, RimL, YhhY) against processed McC and toxic aminoacyl adenylates.
  • Assessment of antibiotic resistance in E. coli strains with altered expression of RimL and YhhY.
  • Identification of natural substrates for RimL.

Main Results:

  • E. coli RimL confers resistance to McC and toxic nonhydrolyzable aminoacyl adenylates by acetylating processed McC.
  • Ribosomal protein L12 is identified as a natural substrate for RimL, alongside processed McC.
  • Overproduced RimL also confers resistance to albomycin, an antibiotic targeting seryl-tRNA synthetase.
  • E. coli YhhY detoxifies aminoacyl adenylates but not processed McC.

Conclusions:

  • RimL and YhhY are crucial for bacterial defense against toxic aminoacyl nucleotides, both exogenous and endogenous.
  • RimL's acetylation activity extends beyond ribosomal proteins to include processed McC, highlighting its broader protective role.
  • The study reveals a novel detoxification pathway involving RimL and YhhY, expanding our understanding of bacterial antibiotic resistance.

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