Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Restarting Stalled Replication Forks02:37

Restarting Stalled Replication Forks

5.0K
DNA replication is initiated at sites containing predefined DNA sequences known as origins of replication. DNA is unwound at these sites by the minichromosome maintenance (MCM) helicase and other factors such as Cdc45 and the associated GINS complex.The unwound single strands are protected by replication protein A (RPA) until DNA polymerase starts synthesizing DNA at the 5’ end of the strand in the same direction as the replication fork. To prevent the replication fork from falling apart,...
5.0K
Restarting Stalled Replication Forks02:37

Restarting Stalled Replication Forks

1.4K
1.4K
DNA Topoisomerases02:02

DNA Topoisomerases

32.1K
Topoisomerases are enzymes that relax overwound DNA molecules during various cell processes, including DNA replication and transcription. These enzymes regulate positive and negative DNA supercoiling without changing the nucleotide sequence. DNA overwinding in a clockwise direction results in positively supercoiled DNA, whereas underwinding in a counterclockwise direction produces negatively supercoiled DNA.
Types and Mechanism of action
Topoisomerases are divided into two main types. ...
32.1K
Self-Locking Screw01:16

Self-Locking Screw

2.9K
A square-threaded screw jack is a mechanical device widely used for lifting heavy loads or applying considerable force. One of the key features that can make a screw jack more effective and reliable is its self-locking capability.
A square-threaded screw jack carrying a load is considered self-locking if the screw retains its position even after the moment applied to it is removed.
2.9K
Deactivation Processes: Jablonski Diagram01:25

Deactivation Processes: Jablonski Diagram

2.2K
Luminescence, the emission of light by a substance that has absorbed energy, is a process that involves the interaction of molecules with light. The energy-level diagram, or Jablonski diagram, is a graphical representation of these interactions, illustrating the various states and transitions a molecule can undergo. In a typical Jablonski diagram, the lowest horizontal line represents the ground-state energy of the molecule, which is usually a singlet state. This state represents the energies...
2.2K
Nonsense-mediated mRNA Decay02:27

Nonsense-mediated mRNA Decay

9.3K
The Upf proteins that carry out nonsense-mediated decay (NMD) are found in all eukaryotic organisms, including humans. Each protein has an individual role, but they need to work in collaboration. Upf1 is an ATP-dependent RNA helicase that unwinds the RNA helix. Because Upf1 can unwind any RNA, Upf2 and Upf3 are required to help Upf1 discriminate between nonsense and normal mRNAs.
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
9.3K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Remodeling of mRNA by eIF4F in human translation initiation.

bioRxiv : the preprint server for biologyĀ·2026
Same author

A ribosomal kinetic checkpoint governs selective mRNA recruitment.

bioRxiv : the preprint server for biologyĀ·2026
Same author

Nanometer-scale RNA protein clusters (RPCs) Foster Helicase Activity of DEAD-box eIF4A.

bioRxiv : the preprint server for biologyĀ·2026
Same author

FMRP drives mRNP targets into translationally silenced complexes.

Molecular cellĀ·2025
Same author

Guidelines for minimal reporting requirements, design and interpretation of experiments involving the use of eukaryotic dual gene expression reporters (MINDR).

Nature structural & molecular biologyĀ·2025
Same author

Human tumor suppressor protein Pdcd4 binds at the mRNA entry channel in theĀ 40S small ribosomal subunit.

Nature communicationsĀ·2024

Related Experiment Video

Updated: Apr 27, 2026

In Situ Time-dependent Dielectric Breakdown in the Transmission Electron Microscope: A Possibility to Understand the Failure Mechanism in Microelectronic Devices
09:26

In Situ Time-dependent Dielectric Breakdown in the Transmission Electron Microscope: A Possibility to Understand the Failure Mechanism in Microelectronic Devices

Published on: June 26, 2015

8.0K

DEAD box unwinding caught in the act.

Brian C Avanzino1, Christopher S Fraser1

  • 1Department of Molecular and Cellular Biology, College of Biological Sciences, University of California, Davis, Davis, CA 95616, USA.

Structure (London, England : 1993)
|July 10, 2014
PubMed
Summary

The DEAD box helicase, eIF4AI, uses dynamic conformational changes to unwind RNA. This study reveals the link between these movements and the enzyme's unwinding function.

Area of Science:

  • Biochemistry
  • Molecular Biology
  • Structural Biology

Background:

  • DEAD box helicases are crucial motor proteins involved in RNA metabolism.
  • eIF4AI is a key DEAD box helicase in translation initiation.
  • Understanding helicase function requires characterizing their dynamic conformational states.

Purpose of the Study:

  • To elucidate the relationship between the dynamic conformational cycle and RNA unwinding activity of eIF4AI.
  • To provide structural insights into the mechanism of RNA unwinding by DEAD box helicases.

Main Methods:

  • The study likely employed structural biology techniques (e.g., X-ray crystallography, cryo-EM) to capture different conformational states.
  • Biochemical assays were probably used to assess RNA binding and unwinding activities.

More Related Videos

Magnetic Tweezers for the Measurement of Twist and Torque
11:41

Magnetic Tweezers for the Measurement of Twist and Torque

Published on: May 19, 2014

25.2K
Design and Synthesis of a Reconfigurable DNA Accordion Rack
07:44

Design and Synthesis of a Reconfigurable DNA Accordion Rack

Published on: August 15, 2018

6.7K

Related Experiment Videos

Last Updated: Apr 27, 2026

In Situ Time-dependent Dielectric Breakdown in the Transmission Electron Microscope: A Possibility to Understand the Failure Mechanism in Microelectronic Devices
09:26

In Situ Time-dependent Dielectric Breakdown in the Transmission Electron Microscope: A Possibility to Understand the Failure Mechanism in Microelectronic Devices

Published on: June 26, 2015

8.0K
Magnetic Tweezers for the Measurement of Twist and Torque
11:41

Magnetic Tweezers for the Measurement of Twist and Torque

Published on: May 19, 2014

25.2K
Design and Synthesis of a Reconfigurable DNA Accordion Rack
07:44

Design and Synthesis of a Reconfigurable DNA Accordion Rack

Published on: August 15, 2018

6.7K
  • Integrative approaches may have combined structural and functional data.
  • Main Results:

    • Sun and colleagues identified distinct conformational states of eIF4AI.
    • A direct correlation was established between specific conformations and RNA unwinding efficiency.
    • The study provides a mechanistic link between protein dynamics and enzymatic function.

    Conclusions:

    • The dynamic conformational cycle of eIF4AI is intrinsically coupled to its RNA unwinding activity.
    • Structural flexibility is essential for the function of DEAD box helicases.
    • This work deepens our understanding of RNA helicase mechanisms.