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Cells are sometimes infected by more than one virus at once. When two viruses disassemble to expose their genomes for replication in the same cell, similar regions of their genomes can pair together and exchange sequences in a process called recombination. Alternatively, viruses with segmented genomes can swap segments in a process called reassortment.
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Influenza is an acute, highly communicable viral disease that affects the respiratory tract and is responsible for seasonal epidemics worldwide. Influenza A is the most prevalent type associated with widespread outbreaks and is subtyped based on two surface glycoproteins: hemagglutinin (H) and neuraminidase (N), as in H1N1. These glycoproteins are essential for viral infectivity, transmission, and immune recognition. Transmission occurs primarily through respiratory droplets and contaminated...
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Related Experiment Video

Updated: Apr 27, 2026

Production of High-Titer Infectious Influenza Pseudotyped Particles with Envelope Glycoproteins from Highly Pathogenic H5N1 and Avian H7N9 Viruses
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Influenza A virus reassortment.

John Steel1, Anice C Lowen

  • 1Department of Microbiology and Immunology, Emory University School of Medicine, Atlanta, GA, USA.

Current Topics in Microbiology and Immunology
|July 11, 2014
PubMed
Summary

Influenza viruses swap gene segments through reassortment, generating vast diversity crucial for viral evolution. Recent studies reveal reassortment's role in influenza A virus history and epidemiology.

Area of Science:

  • Virology
  • Epidemiology
  • Evolutionary Biology

Background:

  • Influenza viruses possess segmented genomes, enabling gene segment exchange.
  • Reassortment occurs when two distinct influenza viruses co-infect a single host cell.
  • This genetic process generates significant viral diversity, impacting viral evolution.

Purpose of the Study:

  • To review recent insights into the role of reassortment in the natural history and epidemiology of influenza A viruses.
  • To describe laboratory methods for studying influenza virus reassortment.
  • To summarize experimental progress in understanding influenza reassortment contexts.

Main Methods:

  • Population-scale phylogenetic analyses to study reassortment in natural influenza A virus populations.

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  • Laboratory-based experimental approaches to investigate the mechanisms and contexts of reassortment.
  • Main Results:

    • Phylogenetic analyses have illuminated the contribution of reassortment to influenza A virus evolution and epidemiology.
    • Experimental studies have advanced the understanding of how and when influenza virus reassortment occurs.

    Conclusions:

    • Reassortment is a key driver of influenza A virus diversity and evolution.
    • Continued research using both population-level and experimental methods is vital for understanding influenza virus dynamics.