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Updated: Apr 26, 2026

On-site DNA Detection of Trypanosomatid Parasites and Nosema ceranae Through Alkaline Lysis Coupled to RPA/CRISPR/Cas12a System
Published on: July 18, 2025
Evidence for weak genetic recombination at the PTP2 locus of Nosema ceranae
Tamara Gómez-Moracho1, Carolina Bartolomé, Raquel Martín-Hernández
1Laboratorio de Patología Apícola, Centro Apícola Regional, JCCM, Marchamalo, 19180, Spain; Grupo de Medicina Xenómica, CIMUS, Universidade de Santiago de Compostela, Santiago de Compostela, Galicia, 15782, Spain; Grupo de Xenómica Comparada de Parásitos Humanos, IDIS, Santiago de Compostela, Galicia, 15782, Spain.
Abstract:
The microsporidian Nosema ceranae is an emergent pathogen that threatens the health of honeybees and other pollinators all over the world. Its recent rapid spread across a wide variety of host species and environments demonstrated an enhanced ability of adaptation, which seems to contradict the lack of evidence for genetic recombination and the absence of a sexual stage in its life cycle. Here we retrieved fresh data of the patterns of genetic variation at the PTP2 locus in naturally infected Apis mellifera colonies, by means of single genome amplification. This technique, designed to prevent the formation of chimeric haplotypes during polymerase chain reaction (PCR), provides more reliable estimates of the diversity levels and haplotype structure than standard PCR-cloning methods. Our results are consistent with low but significant rates of recombination in the history of the haplotypes detected: estimates of the population recombination rate are of the order of 30 and support recent evidence for unexpectedly high levels of variation of the parasites within honeybee colonies. These observations suggest the existence of a diploid stage at some point in the life cycle of this parasite and are relevant for our understanding of the dynamics of its expanding population.
Insights
Nosema ceranae, a honeybee pathogen, shows surprising genetic variation. Our study suggests low but significant recombination rates, hinting at a diploid stage in its life cycle, which aids its adaptation and spread.
Area of Science:
- * Molecular Biology
- * Parasitology
- * Entomology
Background:
- * Nosema ceranae is a significant pathogen impacting honeybee and pollinator health globally.
- * The parasite's rapid spread and adaptation appear inconsistent with its known asexual life cycle and lack of genetic recombination.
- * Understanding N. ceranae's population genetics is crucial for managing its impact on vital pollinators.
Purpose of the Study:
- * To investigate the genetic variation and recombination patterns of Nosema ceranae in naturally infected honeybee colonies.
- * To assess the reliability of single genome amplification (SGA) for analyzing parasite genetic diversity compared to standard methods.
- * To explore the implications of observed genetic variation for N. ceranae's life cycle and adaptive capabilities.
Main Methods:
- * Single genome amplification (SGA) was employed to analyze the PTP2 locus in N. ceranae from infected Apis mellifera.
- * SGA was utilized to prevent chimeric haplotype formation during polymerase chain reaction (PCR), ensuring accurate genetic variation assessment.
- * Population recombination rates were estimated based on the genetic data obtained.
Main Results:
- * Low but statistically significant rates of recombination were detected in the history of N. ceranae haplotypes.
- * Estimates indicated a population recombination rate on the order of 30.
- * The findings support recent observations of high genetic variation within N. ceranae populations in honeybee colonies.
Conclusions:
- * The detected recombination suggests a potential diploid stage in the life cycle of Nosema ceranae, challenging previous assumptions.
- * These genetic insights are vital for comprehending the adaptive capacity and population dynamics of this emergent honeybee pathogen.
- * The study highlights the importance of advanced molecular techniques like SGA for accurate parasite genetic analysis.
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