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Published on: August 16, 2017
Global sensitivity analysis used to interpret biological experimental results
Angela M Jarrett1, Yaning Liu, N G Cogan
1Department of Mathematics, Florida State University, 1017 Academic Way, Tallahassee, FL , 32306, USA, ajarrett@math.fsu.edu.
This study simplifies complex host/pathogen interaction models using global sensitivity analysis. The reduced model accurately captures key dynamics, aiding understanding of immune responses to bacterial infections like osteomyelitis.
Area of Science:
- Computational Biology
- Immunology
- Infectious Disease Modeling
Background:
- Host/pathogen interactions are crucial for understanding immune defects and vaccine efficacy.
- Complex models of these interactions require extensive parameter exploration.
- Simplified models are needed to make these investigations tractable.
Purpose of the Study:
- To employ global sensitivity analysis to reduce the parameter space of a host/pathogen interaction model.
- To identify key parameters governing biofilm infections in mice.
- To create a more computationally efficient yet accurate model for studying osteomyelitis.
Main Methods:
- Global sensitivity analysis was applied to parameters of a mouse biofilm infection model.
- Insignificant parameters were identified and 'frozen' to create a reduced model.
- The reduced model's accuracy was validated against the full model.
Main Results:
- Sensitivity analysis successfully identified parameters that could be fixed without compromising model accuracy.
- A reduced model was developed, utilizing approximately half the original parameter space.
- The reduced model accurately replicated the full model's predictions for biofilm infections.
Conclusions:
- Global sensitivity analysis is an effective technique for simplifying complex biological models.
- The reduced model provides a more efficient tool for investigating immune responses in osteomyelitis.
- This approach can be generalized to other host/pathogen modeling scenarios.
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