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Multiplex PCR Assay for Typing of Staphylococcal Cassette Chromosome Mec Types I to V in Methicillin-resistant Staphylococcus aureus
Published on: September 5, 2013
Tn5253 family integrative and conjugative elements carrying mef(I) and catQ determinants in Streptococcus pneumoniae
Marina Mingoia1, Eleonora Morici1, Gianluca Morroni1
1Unit of Microbiology, Department of Biomedical Sciences and Public Health, Polytechnic University of Marche Medical School, Ancona, Italy.
Abstract:
The linkage between the macrolide efflux gene mef(I) and the chloramphenicol inactivation gene catQ was first described in Streptococcus pneumoniae (strain Spn529), where the two genes are located in a module designated IQ element. Subsequently, two different defective IQ elements were detected in Streptococcus pyogenes (strains Spy029 and Spy005). The genetic elements carrying the three IQ elements were characterized, and all were found to be Tn5253 family integrative and conjugative elements (ICEs). The ICE from S. pneumoniae (ICESpn529IQ) was sequenced, whereas the ICEs from S. pyogenes (ICESpy029IQ and ICESpy005IQ, the first Tn5253-like ICEs reported in this species) were characterized by PCR mapping, partial sequencing, and restriction analysis. ICESpn529IQ and ICESpy029IQ were found to share the intSp 23FST81 integrase gene and an identical Tn916 fragment, whereas ICESpy005IQ has int5252 and lacks Tn916. All three ICEs were found to lack the linearized pC194 plasmid that is usually associated with Tn5253-like ICEs, and all displayed a single copy of a toxin-antitoxin operon that is typically contained in the direct repeats flanking the excisable pC194 region when this region is present. Two different insertion sites of the IQ elements were detected, one in ICESpn529IQ and ICESpy029IQ, and another in ICESpy005IQ. The chromosomal integration of the three ICEs was site specific, depending on the integrase (intSp 23FST81 or int5252). Only ICESpy005IQ was excised in circular form and transferred by conjugation. By transformation, mef(I) and catQ were cotransferred at a high frequency from S. pyogenes Spy005 and at very low frequencies from S. pneumoniae Spn529 and S. pyogenes Spy029.
Insights
The macrolide efflux gene mef(I) and chloramphenicol inactivation gene catQ are linked in IQ elements within Streptococcus bacteria. These elements are mobile genetic elements called integrative and conjugative elements (ICEs) that can transfer antibiotic resistance genes between bacteria.
Area of Science:
- Microbiology
- Genetics
- Molecular Biology
Background:
- The macrolide efflux gene mef(I) and chloramphenicol inactivation gene catQ were first identified together in Streptococcus pneumoniae.
- These linked genes form a module known as the IQ element, which has also been found in Streptococcus pyogenes.
Purpose of the Study:
- To characterize the genetic elements carrying the IQ elements in Streptococcus pneumoniae and Streptococcus pyogenes.
- To investigate the structure, integration, and transfer mechanisms of these mobile genetic elements.
Main Methods:
- Characterization of genetic elements using PCR mapping, partial sequencing, and restriction analysis.
- Sequencing of the integrative and conjugative element (ICE) from S. pneumoniae (ICESpn529IQ).
- Analysis of insertion sites and integrase genes involved in chromosomal integration.
Main Results:
- All three IQ elements studied were found to be part of Tn5253 family integrative and conjugative elements (ICEs).
- Differences were observed in the integrase genes and associated fragments among the ICEs, with ICESpn529IQ and ICESpy029IQ sharing common features, while ICESpy005IQ differed.
- All three ICEs lacked the typical linearized pC194 plasmid and contained a single copy of a toxin-antitoxin operon.
- Chromosomal integration was site-specific, dependent on the integrase.
- Only ICESpy005IQ was capable of excision and transfer by conjugation.
- Transformation experiments showed high-frequency cotransfer of mef(I) and catQ from S. pyogenes Spy005, but low frequencies from the other strains.
Conclusions:
- The IQ elements are integrated into Tn5253-like ICEs in both S. pneumoniae and S. pyogenes.
- The genetic makeup and transfer capabilities of these ICEs vary, influencing the spread of antibiotic resistance genes.
- The study highlights the role of ICEs in the dissemination of macrolide and chloramphenicol resistance genes in streptococci.
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