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Published on: November 28, 2016
Human metapneumovirus prevalence and molecular epidemiology in respiratory outbreaks in Ontario, Canada
Alefiya Neemuchwala1, Venkata R Duvvuri, Alex Marchand-Austin
1Ontario Agency for Health Protection and Promotion, Toronto, Ontario, Canada.
Abstract:
Human metapneumovirus (hMPV) has been identified previously as a cause of respiratory outbreaks in adults, including the elderly. The objective of this study was to document respiratory outbreaks that were caused by hMPV in Ontario, Canada and to identify the various circulating genotypes during April 2009-February 2012. The majority of the outbreaks that were part of this study were in adults (>65 years). Total nucleic acid extraction was done on 123 residual anonymized clinical specimens from 51 different respiratory outbreaks. Specimens were subjected to PCR amplification and Sanger sequencing targeting the F and G genes of hMPV. Phylogenetic analysis was performed to identify genotypes. HMPV accounted for 195 (8.5%) of 2,292 respiratory outbreaks. Genotype A2b was most prevalent, detected in 28 (54.9%) of 51 typed hMPV-positive outbreaks. The genotype A2b2 that was described recently was also identified. In earlier reports, subtype A1 was reported in Canada which was absent in the specimens typed in this study. This shift in genotype may be significant in terms of disease severity, and for any future vaccine considerations. Regular testing for hMPV should be done as part of outbreak investigation.
Insights
Human metapneumovirus (hMPV) caused 8.5% of respiratory outbreaks in Ontario, Canada, primarily affecting adults over 65. Genotype A2b was the most prevalent, indicating a potential shift from previously reported subtypes.
Area of Science:
- Virology
- Epidemiology
- Public Health
Background:
- Human metapneumovirus (hMPV) is a known cause of respiratory illness outbreaks in adults, particularly the elderly.
- Understanding hMPV circulation and genetic diversity is crucial for public health interventions and vaccine development.
Purpose of the Study:
- To document hMPV-caused respiratory outbreaks in Ontario, Canada, between April 2009 and February 2012.
- To identify the specific hMPV genotypes circulating during this period, with a focus on outbreaks in adults over 65.
Main Methods:
- Analysis of 123 anonymized clinical specimens from 51 respiratory outbreaks.
- Nucleic acid extraction, PCR amplification, and Sanger sequencing of hMPV F and G genes.
- Phylogenetic analysis to determine hMPV genotypes.
Main Results:
- hMPV was responsible for 195 (8.5%) of 2,292 investigated respiratory outbreaks.
- Genotype A2b was the predominant strain, found in 54.9% of typed hMPV outbreaks.
- A shift in prevalent genotypes was observed, with the absence of previously reported subtype A1.
Conclusions:
- Genotype A2b is currently the most prevalent hMPV strain in Ontario, Canada, impacting adult populations.
- The observed shift in hMPV genotypes may have implications for disease severity and vaccine efficacy.
- Routine hMPV testing should be integrated into respiratory outbreak investigations.
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