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Related Concept Videos

The Ras Gene02:38

The Ras Gene

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The Ras-gene-encoded proteins are regulators of signaling pathways controlling cell proliferation, differentiation, or cell survival. The Ras-gene family in humans constitutes three primary members—the HRas, NRas, and KRas. These genes code for four functionally distinct yet closely related proteins—the HRas, NRas, KRas4A, and KRas4B. The involvement of mutant Ras genes in human cancer was first discovered in 1982 and is among the most common causes of human tumorigenesis.
Ras is a...
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The Ras Gene02:38

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Ribosome Profiling02:24

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Ribosome profiling or ribo-sequencing is a deep sequencing technique that produces a snapshot of active translation in a cell. It selectively sequences the mRNAs protected by ribosomes to get an insight into a cell’s translation landscape at any given point in time.
Applications of ribosome profiling
Ribosome profiling has many applications, including in vivo monitoring of translation inside a particular organ or tissue type and quantifying new protein synthesis levels.
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Leaky Scanning02:28

Leaky Scanning

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During most eukaryotic translation processes, the small 40S ribosome subunit scans an mRNA from its 5' end until it encounters the first start AUG codon. The large 60S ribosomal subunit then joins the smaller one to initiate protein synthesis. The location of the translation initiation is largely determined by the nucleotides near the start codon as there may be multiple translation initiation sites present on the mRNA.  Marilyn Kozak discovered that the sequence RCCAUGG (where R...
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MAPK Signaling Cascades01:07

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Mitogen-activated protein kinase, or MAPK pathway, activates three sequential kinases to regulate cellular responses such as proliferation, differentiation, survival, and apoptosis. The canonical MAPK pathway starts with a mitogen or growth factor binding to an RTK. The activated RTKs stimulate Ras, which recruits Raf or MAP3 Kinase (MAPKKK), the first kinase of the MAPK signaling cascade. Raf further phosphorylates and activates MEK or MAP2 Kinases (MAPKK), which in turn phosphorylates MAP...
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Riboswitches01:56

Riboswitches

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Riboswitches are non-coding mRNA domains that regulate the transcription and translation of downstream genes without the help of proteins. Riboswitches bind directly to a metabolite and can form unique stem-loop or hairpin structures in response to the amount of the metabolite present. They have two distinct regions – a metabolite-binding aptamer and an expression platform.
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De novo Identification of Actively Translated Open Reading Frames with Ribosome Profiling Data
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Decoding RAS isoform and codon-specific signalling.

Anna U Newlaczyl1, Fiona E Hood1, Judy M Coulson1

  • 1*Division of Cellular and Molecular Physiology, Institute of Translational Medicine, University of Liverpool, Liverpool L69 3BX, U.K.

Biochemical Society Transactions
|August 12, 2014
PubMed
Summary
This summary is machine-generated.

RAS proteins are crucial signaling hubs in cancer, with three isoforms that are not functionally redundant. This review details isoform differences and common mutation mechanisms driving cancer.

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Area of Science:

  • Molecular Biology
  • Oncology
  • Cell Signaling

Background:

  • RAS proteins are central regulators of cellular signaling pathways.
  • Mutations in RAS genes occur in approximately 30% of human cancers.
  • Three highly similar RAS isoforms (KRAS, HRAS, NRAS) exist but exhibit distinct biological functions.

Purpose of the Study:

  • To review and define the functional differences between RAS protein isoforms.
  • To identify commonly mutated codons within each RAS isoform.
  • To elucidate the underlying mechanisms of RAS-mediated oncogenesis.

Main Methods:

  • Literature review of recent research on RAS protein biology.
  • Analysis of mutation data from cancer genomics databases.
  • Discussion of signaling network responses associated with RAS isoforms and mutations.

Main Results:

  • Distinct network responses are elicited by each RAS isoform, despite their sequence similarity.
  • Specific codons are frequently mutated across different RAS isoforms, leading to oncogenic activation.
  • Understanding these differences is key to deciphering RAS-driven cancer signaling.

Conclusions:

  • RAS isoform-specific functions and mutation patterns are critical for cancer development.
  • Targeted therapeutic strategies may benefit from considering these isoform-specific characteristics.
  • Further characterization of RAS signaling networks will advance cancer treatment.