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Published on: February 3, 2012
Association of CDKN2B-AS and WNT4 genetic polymorphisms in Korean patients with endometriosis
Gyoung Hoon Lee1, Young Min Choi2, Min A Hong3
1I-one Center, Seoul Women's Hospital, Bucheon, South Korea.
Objective:
To investigate whether specific genetic polymorphisms in the cyclin-dependent kinase inhibitor 2B antisense RNA (CDKN2B-AS) gene and near the wingless-type MMTV integration site family member 4 (WNT4) gene are associated with endometriosis in a Korean population.
Design:
Case-control genetic association study.
Setting:
University.
Patient(S):
Surgically or histologically diagnosed cases of endometriosis (n=673) and controls (n=500) among a population of ethnic Koreans.
Intervention(S):
None.
Main Outcome Measure(S):
Genotype distribution and synergistic interaction.
Result(S):
Significant differences were found in the allele distributions of the CC genotype of the rs10965235 single-nucleotide polymorphism (SNP) of the CDKN2B-AS gene and the GG genotype of the rs16826658 SNP on chromosome 1p36 between the endometriosis cases and the controls (rs10965235: 69.7% CC, 26.9% CA, and 3.4% AA vs. 59.2% CC, 35.2% CA, and 5.6% AA; rs16826658: 33.7% GG, 48.4% GT, and 17.8% TT vs. 25.6% GG, 49.8% GT, and 24.6% TT, respectively). A significant interaction was not found between the CC genotype of the rs10965235 SNP and the GG genotype of the rs16826658 SNP after Bonferroni correction (32.8% of CC+GG and 67.2% of CC+non-GG in the endometriosis cases vs. 25.0% of CC+GG and 75.0% of CC+non-GG in the controls).
Conclusion(S):
Our results suggest that the rs10965235 SNP in the CDKN2B-AS gene and the rs16826658 SNP near the WNT4 gene were significantly associated with endometriosis in this Korean population.
Insights
Genetic variations in the cyclin-dependent kinase inhibitor 2B antisense RNA (CDKN2B-AS) gene and near the wingless-type MMTV integration site family member 4 (WNT4) gene are linked to endometriosis risk in Koreans. These findings highlight potential genetic markers for endometriosis susceptibility in this population.
Area of Science:
- Genetics
- Reproductive Medicine
- Molecular Biology
Background:
- Endometriosis is a complex gynecological disorder with increasing prevalence worldwide.
- Genetic factors are implicated in endometriosis pathogenesis, but specific gene associations require further investigation.
- The cyclin-dependent kinase inhibitor 2B antisense RNA (CDKN2B-AS) and wingless-type MMTV integration site family member 4 (WNT4) genes are potential candidates for endometriosis susceptibility.
Purpose of the Study:
- To examine the association between specific single-nucleotide polymorphisms (SNPs) in the CDKN2B-AS and WNT4 genes and endometriosis risk.
- To investigate potential synergistic interactions between these genetic variants in a Korean population.
Main Methods:
- A case-control genetic association study was conducted.
- Participants included 673 Korean women with endometriosis and 500 controls.
- Genotyping was performed for specific SNPs in the CDKN2B-AS (rs10965235) and WNT4 (rs16826658) genes.
Main Results:
- The CC genotype of the rs10965235 SNP in CDKN2B-AS showed a significant difference in allele distribution between cases and controls.
- The GG genotype of the rs16826658 SNP near WNT4 also exhibited a significant difference in allele distribution.
- No significant synergistic interaction was detected between these two SNPs after Bonferroni correction.
Conclusions:
- The rs10965235 SNP in the CDKN2B-AS gene and the rs16826658 SNP near the WNT4 gene are significantly associated with endometriosis in the studied Korean population.
- These genetic variants may contribute to endometriosis susceptibility.
- Further research is warranted to elucidate the functional mechanisms underlying these associations.
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