Histone H3 lysine-to-methionine mutants as a paradigm to study chromatin signaling

Hans-Martin Herz1, Marc Morgan1, Xin Gao1

  • 1Stowers Institute for Medical Research, 1000 East 50th Street, Kansas City, MO 64110, USA.

Science (New York, N.Y.)
|August 30, 2014
PubMed

Insights

Histone H3 lysine(27)-to-methionine (H3K27M) mutations in pediatric gliomas were modeled in Drosophila. These mutants disrupt methylation pathways, offering new tools for studying chromatin signaling and enzyme interactions.

Area of Science:

  • Molecular Biology
  • Genetics
  • Epigenetics

Background:

  • Gain-of-function H3K27M mutations are linked to aggressive pediatric gliomas.
  • Histone methylation is crucial for gene regulation and chromatin structure.

Purpose of the Study:

  • To establish Drosophila models for pathogenic histone H3K27M and H3K9M mutations.
  • To investigate the in vivo effects of these histone mutants on methylation pathways and gene expression.
  • To explore the utility of histone lysine-to-methionine mutants as tools for studying chromatin signaling.

Main Methods:

  • Generation of Drosophila melanogaster models expressing H3K27M and H3K9M mutants.
  • Analysis of Polycomb Repressive Complex 2 (PRC2) target gene expression.
  • Assessment of H3K9 methylation levels and position-effect variegation.
  • Biochemical assays to study the interaction of KDM3B/JHDM2 with H3K9M nucleosomes.

Main Results:

  • H3K27M overexpression phenocopied PRC2 loss-of-function, leading to gene derepression and developmental issues.
  • H3K9M mutants reduced H3K9 methylation and affected heterochromatic silencing.
  • KDM3B/JHDM2 was found to associate with H3K9M nucleosomes, and its misregulation impacted H3K9 methylation.

Conclusions:

  • Histone lysine-to-methionine mutants serve as effective in vivo tools for inhibiting methylation pathways.
  • These mutants provide insights into chromatin signaling by acting as biochemical reagents for enzyme capture.
  • The study validates Drosophila as a model for investigating histone mutations in cancer and chromatin biology.

Related Concept Videos

Histone Modification02:32

Histone Modification

The histone proteins have a flexible N-terminal tail extending out from the nucleosome. These histone tails are often subjected to post-translational modifications such as acetylation, methylation, phosphorylation, and ubiquitination. Particular combinations of these modifications form “histone codes” that influence the chromatin folding and tissue-specific gene expression.
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone...
14.5K
Histone Modification02:32

Histone Modification

4.0K
Spreading of Chromatin Modifications02:25

Spreading of Chromatin Modifications

The histone proteins in the nucleosomes are post-translationally modified (PTM) to increase or decrease access to DNA. The commonly observed PTMs are methylation, acetylation, phosphorylation, and ubiquitination of lysine amino acids in the histone H3 tail region. These histone modifications have specific meaning for the cell. Hence, they are called "histone code". The protein complex involved in histone modification is termed as "reader-writer" complex.
Writers
The writer...
8.1K
Heterochromatin02:38

Heterochromatin

The extent of chromatin compaction can be studied by staining chromatin using specific DNA binding dyes. Under the microscope, the dense-compacted regions that take up more dye are called heterochromatin. Heterochromatin is further classified into two forms – constitutive heterochromatin and facultative heterochromatin.
Constitutive heterochromatin: It is a highly compact region of chromatin that is mostly concentrated in the centromere and telomere. Unlike euchromatin, the amino acid at...
12.0K
Heterochromatin02:38

Heterochromatin

3.7K
Chromatin Modification in iPS Cells01:32

Chromatin Modification in iPS Cells

Chromatin modification alters gene expression; therefore, scientists can add histone-modifying enzymes, histone variants, and chromatin remodeling complexes to somatic cells to aid reprogramming into pluripotent stem (iPS) cells.
Compact chromatin makes reprogramming difficult. Enzymes, such as histone demethylases and acetyltransferases, are often added during reprogramming to loosen the chromatin, making the DNA more accessible to transcription factors. Molecules that inhibit histone...
1.5K