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Updated: Apr 24, 2026

Analysis of Microglia and Monocyte-derived Macrophages from the Central Nervous System by Flow Cytometry
Published on: June 22, 2017
Ontogeny and functions of central nervous system macrophages
Atsuko Katsumoto1, Haiyan Lu1, Aline S Miranda1
1Neuroinflammation Research Center, Lerner Research Institute, Cleveland Clinic, Cleveland, OH 44195; and.
Abstract:
Microglia, the only nonneuroepithelial cells found in the parenchyma of the CNS, originate during embryogenesis from the yolk sac and enter the CNS quite early (embryonic day 9.5-10 in mice). Thereafter, microglia are maintained independently of any input from the blood and, in particular, do not require hematopoietic stem cells as a source of replacement for senescent cells. Monocytes are hematopoietic cells, derived from bone marrow. The ontogeny of microglia and monocytes is important for understanding CNS pathologies. Microglial functions are distinct from those of blood-derived monocytes, which invade the CNS only under pathological conditions. Recent data reveal that microglia play an important role in managing neuronal cell death, neurogenesis, and synaptic interactions. In this article, we discuss the physiology of microglia and the functions of monocytes in CNS pathology. We address the roles of microglia and monocytes in neurodegenerative diseases as an example of CNS pathology.
Insights
Microglia, CNS immune cells originating from the yolk sac, differ functionally from blood monocytes. Understanding their distinct ontogeny is crucial for neurodegenerative disease research.
Area of Science:
- Neuroscience
- Immunology
- Cell Biology
Background:
- Microglia are the primary resident immune cells within the central nervous system (CNS).
- They originate from embryonic yolk sac progenitors and are maintained independently of blood-derived monocytes.
- Monocytes are hematopoietic cells originating from bone marrow, typically entering the CNS only during pathological conditions.
Purpose of the Study:
- To elucidate the distinct ontogeny and physiological roles of microglia compared to monocytes.
- To highlight the importance of understanding these differences for CNS pathologies.
- To discuss the involvement of both cell types in neurodegenerative diseases.
Main Methods:
- Review of existing literature on microglial and monocyte ontogeny and function.
- Comparative analysis of cellular origins and maintenance mechanisms.
- Discussion of roles in CNS physiology and pathology, using neurodegenerative diseases as a model.
Main Results:
- Microglia and monocytes have separate embryonic origins and distinct developmental trajectories.
- Microglial functions, including neuronal support and synaptic regulation, are unique and independent of blood input.
- Monocytes infiltrate the CNS primarily under pathological conditions, exhibiting different functions than resident microglia.
Conclusions:
- The distinct ontogeny of microglia and monocytes is critical for understanding CNS health and disease.
- Microglia play essential roles in normal brain function, including managing neuronal cell death and neurogenesis.
- Differentiating microglial and monocyte roles is key for developing targeted therapies for neurodegenerative diseases.
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