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Architecting the Finite Element Method Pipeline for the GPU.

Zhisong Fu1, T James Lewis1, Robert M Kirby1

  • 1School of Computing, University of Utah, Salt Lake City, UT, USA ; Scientific Computing and Imaging Institute, University of Utah, Salt Lake City, USA.

Journal of Computational and Applied Mathematics
|September 10, 2014
PubMed
Summary
This summary is machine-generated.

This study accelerates the finite element method (FEM) pipeline by moving computations to the GPU. The new GPU-based algorithms achieve significant speedups for FEM assembly and solving linear systems.

Keywords:
algebraic multigrid (AMG)finite element method (FEM)graphical processing units (GPUs)

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Area of Science:

  • Computational Science and Engineering
  • Numerical Analysis
  • High-Performance Computing

Background:

  • The finite element method (FEM) is crucial for solving partial differential equations (PDEs) across science and engineering.
  • Accelerating the FEM pipeline is essential for computationally intensive applications.
  • Modern hardware, like Graphics Processing Units (GPUs), offers potential for significant performance gains.

Purpose of the Study:

  • To develop and present algorithms and data structures for executing the entire FEM pipeline on a GPU.
  • To enable faster solutions for PDEs using FEM on massively parallel architectures.

Main Methods:

  • An efficient GPU-based algorithm for local element information generation and global linear system assembly.
  • Implementation of a conjugate gradient method with an algebraic multi-grid (AMG) preconditioner for solving linear systems on the GPU.
  • A novel fine-grained parallelism strategy, multigrid cycling, and data mapping optimized for GPU architecture.

Main Results:

  • Achieved up to an 87x speedup for on-GPU assembly compared to serial CPU implementation.
  • Demonstrated up to a 51x speedup for the GPU-based linear system solver versus state-of-the-art serial CPU solvers.
  • The proposed GPU-based FEM pipeline shows favorable performance compared to existing GPU sparse linear solvers.

Conclusions:

  • The entire FEM pipeline can be effectively implemented on GPUs, leading to substantial performance improvements.
  • The developed GPU algorithms and data structures significantly accelerate FEM computations, particularly for elliptic PDEs.
  • This work paves the way for more efficient and faster simulations in various scientific and engineering domains utilizing GPUs.