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Updated: Apr 23, 2026

Adapting Gastrointestinal Organoids for Pathogen Infection and Single Cell Sequencing under Biosafety Level 3 BSL-3 Conditions
Published on: September 10, 2021
Looking at protists as a source of pathogenic viruses
1Aix-Marseille University, Unité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes (URMITE), UM63, CNRS 7278, IRD 198, INSERM U1095, Facultés de Médecine et de Pharmacie, Marseille, France; Institut Hospitalo-Universitaire (IHU) Méditerranée Infection, Pôle des Maladies Infectieuses et Tropicales Clinique et Biologique, Fédération de Bactériologie-Hygiène-Virologie, Centre Hospitalo-Universitaire Timone, Assistance Publique, Hôpitaux de Marseille, Marseille, France.
Giant viruses, initially discovered through amoeba co-culture, are now recognized as potential opportunistic human pathogens. Research confirms their isolation in human infections, highlighting a new area of infectious disease.
Area of Science:
- Microbiology
- Virology
- Infectious Diseases
Background:
- Protozoa, like amoebae, can harbor bacteria, exemplified by Legionella pneumophila causing Legionnaires' disease.
- The discovery of Acanthamoeba polyphaga mimivirus, a giant virus, emerged from studies searching for Legionella in the environment using amoeba co-culture.
Purpose of the Study:
- To review methods for isolating giant viruses from environmental samples.
- To investigate the potential of giant viruses as human pathogens, drawing parallels with known protozoan-associated pathogens.
Main Methods:
- Amoeba co-culture techniques for virus isolation.
- Review of isolation methods for various giant viruses (Mimiviridae, Pithovirus, etc.).
- Indirect evidence, including sero-epidemiologic studies, to assess human pathogenicity.
Main Results:
- Several giant viruses, including Mimiviridae and Marseilleviridae, have been isolated since the discovery of mimivirus.
- Indirect evidence suggests giant viruses can infect humans.
- Recent isolations confirm Mimiviridae and Marseilleviridae in human patients with pathological conditions.
Conclusions:
- Giant viruses are emerging as opportunistic human pathogens.
- Amoeba co-culture remains a key method for discovering novel viruses with pathogenic potential.
- Further research is warranted to understand the full spectrum of giant virus-associated human diseases.
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