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Updated: Apr 23, 2026

In Vitro Analysis of E3 Ubiquitin Ligase Function
Published on: May 14, 2021
Mulan E3 ubiquitin ligase interacts with multiple E2 conjugating enzymes and participates in mitophagy by recruiting
Camilla T Ambivero1, Lucia Cilenti1, Stacey Main1
1Burnett School of Biomedical Sciences, College of Medicine, University of Central Florida, 12722 Research Parkway, Orlando, FL 32826, USA.
Abstract:
Mulan is an E3 ubiquitin ligase embedded in the outer mitochondrial membrane (OMM) with its RING finger facing the cytoplasm and a large domain located in the intermembrane space (IMS). Mulan is known to have an important role in cell growth, cell death, and more recently in mitophagy. The mechanism of its function is poorly understood; but as an E3 ligase it is expected to interact with specific E2 ubiquitin conjugating enzymes and these complexes will bind and ubiquitinate specific substrates. The unique topology of Mulan can provide a direct link of communicating mitochondrial signals to the cytoplasm. Our studies identified four different E2 conjugating enzymes (Ube2E2, Ube2E3, Ube2G2 and Ube2L3) as specific interactors of Mulan. Each of these E2 conjugating enzymes was fused to the RING finger domain of Mulan and used in a modified yeast two-hybrid screen. Several unique interactors for each Mulan-E2 complex were isolated. One such specific interactor of Mulan-Ube2E3 was the GABARAP (GABAA receptor-associated protein). GABARAP is a member of the Atg8 family of proteins that plays a major role in autophagy/mitophagy. The interaction of GABARAP with Mulan-Ube2E3 required an LC3-interacting region (LIR) located in the RING finger domain of Mulan as well as the presence of Ube2E3. The isolation of four different E2 conjugating enzymes, as specific partners of Mulan E3 ligase, suggests that Mulan is involved in multiple biological pathways. In addition, the interaction of GABARAP with Mulan-Ube2E3 supports the role of Mulan as an important regulator of mitophagy and provides a plausible mechanism for its function in this process.
Insights
Mulan, an E3 ubiquitin ligase, interacts with four E2 enzymes, including Ube2E3. This interaction facilitates mitophagy regulation through GABARAP binding, clarifying Mulan
Area of Science:
- Mitochondrial biology
- Ubiquitin-proteasome system
- Autophagy and mitophagy
Background:
- Mulan is an outer mitochondrial membrane E3 ubiquitin ligase involved in cell growth, death, and mitophagy.
- Its precise mechanism of action and substrate specificity remain largely uncharacterized.
- The unique topology of Mulan suggests a role in signaling between mitochondria and the cytoplasm.
Purpose of the Study:
- To identify specific E2 ubiquitin conjugating enzymes that interact with Mulan.
- To elucidate the molecular mechanism underlying Mulan's function in mitophagy.
- To explore potential novel substrates and pathways regulated by Mulan.
Main Methods:
- Modified yeast two-hybrid screens were employed to identify Mulan-E2 enzyme interactions.
- Specific Mulan E2 complexes were generated by fusing E2 conjugating enzymes to Mulan's RING finger domain.
- Interaction studies were performed to validate the binding of identified interactors.
Main Results:
- Four E2 conjugating enzymes (Ube2E2, Ube2E3, Ube2G2, Ube2L3) were identified as specific Mulan interactors.
- A novel interaction between Mulan-Ube2E3 and GABARAP (a member of the Atg8 family) was discovered.
- This interaction requires Mulan's LC3-interacting region (LIR) and the presence of Ube2E3.
Conclusions:
- Mulan functions through specific E2 enzyme interactions, suggesting its involvement in multiple cellular pathways.
- The interaction with GABARAP provides a mechanistic link for Mulan's role in mitophagy.
- Mulan acts as a key regulator in mitophagy, bridging mitochondrial status to the autophagic machinery.
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