Nucleotide sequence and structural organization of the human FMS proto-oncogene
A Hampe1, B M Shamoon, M Gobet
1Laboratoire d'Hematologie Experimentale, Centre Hayem, Hospital Saint Louis, Paris, France.
Abstract:
The human proto-oncogene c-fms [FMS] on chromosome 5q33.3 encodes a transmembrane glycoprotein with tyrosine kinase activity that functions as the cell surface receptor for the macrophage colony stimulating factor (CSF-1 or M-CSF). Overlapping bacteriophage clones that included 35 kb of the FMS locus and contained the complete coding sequence of the CSF-1 receptor were subjected to nucleotide sequencing analysis. Comparison with the cDNA sequence of the human c-fms gene indicated that at least one 5' noncoding exon is located far upstream (ca. 26 kb) from sequences encoding the CSF-1 receptor. The FMS coding sequence consists of 21 small exons and heterogeneously sized introns, ranging from 6.3 kb to less than 0.1 kb in complexity.
Insights
The FMS gene encodes the CSF-1 receptor, a key protein in cell signaling. Sequencing revealed its complex structure, including a distant upstream exon, crucial for understanding its function.
Area of Science:
- Molecular Biology
- Genetics
- Oncology
Background:
- The human proto-oncogene c-fms (FMS) encodes a tyrosine kinase receptor for macrophage colony-stimulating factor (CSF-1/M-CSF).
- Understanding the FMS gene structure is vital for its role in cell growth and differentiation.
Purpose of the Study:
- To analyze the nucleotide sequence of the human c-fms gene locus.
- To characterize the genomic organization of the CSF-1 receptor.
Main Methods:
- Nucleotide sequencing of overlapping bacteriophage clones spanning 35 kb of the FMS locus.
- Comparison of genomic DNA sequence with the known cDNA sequence of the human c-fms gene.
Main Results:
- The complete coding sequence of the CSF-1 receptor was identified.
- A 5' noncoding exon was located approximately 26 kb upstream of the coding sequence.
- The FMS coding sequence comprises 21 small exons separated by introns of variable sizes.
Conclusions:
- The FMS gene exhibits a complex genomic structure with a distantly located upstream exon.
- This detailed structural information provides a foundation for further studies on FMS gene regulation and function.
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