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Immunostaining for DNA Modifications: Computational Analysis of Confocal Images
Published on: September 7, 2017
[Expression and methylation status of Foxp3 in human hepatocellular carcinoma]
Shan Dang1, Pu Chen, Bingfei Zhang
1Second Department of Gastroenterology, Shanxi Provincial People's Hospital, Xi'an 710068, China.
Objective:
To gain insights into the role of forkhead box protein 3 (Foxp3) in the pathogenesis of hepatocellular carcinoma (HCC) by performing a comparative analysis of Foxp3 mRNA expression and promoter methylation status in HCC and normal liver tissues.
Methods:
Thirty-nine HCC and 13 normal liver tissue specimens were evaluated by real-time quantitative PCR and pyrosequencing to measure the expression of Foxp3 mRNA and determine the methylation status of its promoter, respectively. Statistical analyses of the data were conducted by rank-sum test and Spearman's rank correlation coefficient test.
Results:
The HCC specimens showed significantly higher mRNA expression of Foxp3 (vs. normal liver tissues, Z =-2.770, P =0.0056). Moreover, the HCC specimens showed significant hypomethylation of the Foxp3 promoter site A (vs. normal liver tissues, Z =2.118, P =0.0339), and the Foxp3 mRNA level was negatively correlated with the methylation of site A (rs =-0.344, P =0.046). None of the other four sites in the Foxp3 promoter showed a significant difference in methylation, and the overall methylation was not significantly different between the HCC and normal liver tissues.
Conclusion:
Overexpression and low methylation of Foxp3 may be involved in the oncogenic and progression processes of HCC.
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