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Updated: Apr 23, 2026

Size Exclusion Chromatography to Analyze Bacterial Outer Membrane Vesicle Heterogeneity
Published on: March 31, 2021
The lethal cargo of Myxococcus xanthus outer membrane vesicles
James E Berleman1, Simon Allen2, Megan A Danielewicz3
1Life Sciences Division, Lawrence Berkeley National Laboratory Berkeley, CA, USA ; Department of Molecular and Cell Biology, University of California, Berkeley Berkeley, CA, USA ; School of Biology, St. Mary's College Moraga, CA, USA.
Abstract:
Myxococcus xanthus is a bacterial micro-predator known for hunting other microbes in a wolf pack-like manner. Outer membrane vesicles (OMVs) are produced in large quantities by M. xanthus and have a highly organized structure in the extracellular milieu, sometimes occurring in chains that link neighboring cells within a biofilm. OMVs may be a vehicle for mediating wolf pack activity by delivering hydrolytic enzymes and antibiotics aimed at killing prey microbes. Here, both the protein and small molecule cargo of the OMV and membrane fractions of M. xanthus were characterized and compared. Our analysis indicates a number of proteins that are OMV-specific or OMV-enriched, including several with putative hydrolytic function. Secondary metabolite profiling of OMVs identifies 16 molecules, many associated with antibiotic activities. Several hydrolytic enzyme homologs were identified, including the protein encoded by MXAN_3564 (mepA), an M36 protease homolog. Genetic disruption of mepA leads to a significant reduction in extracellular protease activity suggesting MepA is part of the long-predicted (yet to date undetermined) extracellular protease suite of M. xanthus.
Insights
Myxococcus xanthus outer membrane vesicles (OMVs) deliver enzymes and antibiotics for microbial predation. The study identified OMV-specific proteins and molecules, revealing MepA protease
Area of Science:
- Microbiology
- Bacterial Predation
- Extracellular Vesicles
Background:
- Myxococcus xanthus is a predatory bacterium using a 'wolf pack' strategy.
- Outer membrane vesicles (OMVs) are abundant in M. xanthus and form extracellular structures.
- OMVs are hypothesized to deliver enzymes and antibiotics for prey capture.
Purpose of the Study:
- To characterize and compare the protein and small molecule cargo of M. xanthus OMVs and membrane fractions.
- To identify OMV-specific or enriched proteins and small molecules.
- To investigate the role of identified hydrolytic enzymes in M. xanthus extracellular activity.
Main Methods:
- Proteomic analysis of OMVs and membrane fractions.
- Small molecule profiling of OMVs.
- Genetic disruption of candidate genes (e.g., mepA) and assessment of extracellular protease activity.
Main Results:
- Identification of OMV-specific/enriched proteins, including putative hydrolytic enzymes.
- Detection of 16 small molecules in OMVs, many with antibiotic properties.
- Disruption of MXAN_3564 (mepA) significantly reduced extracellular protease activity, implicating MepA in this function.
Conclusions:
- M. xanthus OMVs carry a cargo of hydrolytic enzymes and antibiotics potentially mediating predatory behavior.
- MepA is identified as a key component of the M. xanthus extracellular protease system.
- OMVs play a crucial role in the ecological interactions and predatory strategies of M. xanthus.
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