Related Experiment Video
Updated: Apr 23, 2026

08:35
Identification of Alternative Splicing and Polyadenylation in RNA-seq Data
Published on: June 24, 2021
5.9K
The expression of NPPA splice variants during mouse cardiac development
Masoumeh Fakhr Taha1, Arash Javeri
1Department of Medical Biotechnology, National Institute of Genetic Engineering and Biotechnology (NIGEB) , Tehran, Iran.
DNA and Cell Biology
|September 27, 2014
Summary
New research reveals intron-retained splice variants of the Natriuretic peptide precursor-A (NPPA) gene during early mouse heart development and in adipose tissue. These findings expand our understanding of NPPA gene expression in cardiogenesis.
Area of Science:
- Cardiovascular Biology
- Molecular Biology
- Developmental Biology
Background:
- Natriuretic peptide precursor-A (NPPA) encodes atrial natriuretic peptide (ANP), a crucial marker for embryonic heart development.
- While human NPPA exhibits alternative splicing, no such variants were previously reported in mice.
- Investigating NPPA gene expression is vital for understanding cardiac differentiation and development.
Purpose of the Study:
- To explore the expression patterns of the NPPA gene during the cardiac differentiation of mouse adipose-tissue-derived stem cells (ADSCs) and embryonic stem (ES) cells.
- To identify and characterize alternatively spliced variants of NPPA in mouse models.
- To determine the role of NPPA isoforms in early cardiogenesis and adult cardiac tissue.
Main Methods:
- Reverse-transcription polymerase chain reaction (RT-PCR) was employed to analyze NPPA gene expression.
- Cardiac differentiation was induced in mouse ADSCs and ES cells.
- NPPA expression was examined in embryonic mouse hearts and mature cardiomyocytes.
Main Results:
- Cardiac-specific markers, including ANP, were detected in differentiated cells.
- Three novel intron-retained splice variants of NPPA were identified during ADSC and ES cell cardiac differentiation.
- These intron-retained NPPA variants were also found in early embryonic mouse hearts and freshly isolated stromal vascular fraction of adipose tissue.
- Only the canonical NPPA isoform was observed in mature cardiomyocytes of 1-week-old mice.
Conclusions:
- The study provides the first evidence of intron-retained NPPA mRNA splice variants during early mouse cardiogenesis.
- These variants are also expressed in mouse adipose tissue, suggesting a broader role for NPPA.
- Findings contribute to a deeper understanding of NPPA gene regulation and its significance in cardiac development and tissue biology.
Related Concept Videos
Alternative RNA Splicing
20.4K
Alternative RNA splicing is the regulated splicing of exons and introns to produce different mature mRNAs from a single pre-mRNA. Unlike in constitutive splicing where a single gene produces a single type of mRNA, alternative splicing allows an organism to produce multiple proteins from a single gene and plays an important role in protein diversity.
There are five types of alternative RNA splicing that vary in the ways the pre-mRNA segments are removed or retained in the mature mRNA. The first...
There are five types of alternative RNA splicing that vary in the ways the pre-mRNA segments are removed or retained in the mature mRNA. The first...
20.4K
Alternative RNA Splicing
4.2K
4.2K
RNA Splicing
53.2K
Splicing is the process by which eukaryotic RNA is edited before its translation into protein. The RNA strand transcribed from eukaryotic DNA is called the primary transcript. The primary transcripts that become mRNAs are called precursor messenger RNAs (pre-mRNAs). Eukaryotic pre-mRNA contains alternating sequences of exons and introns. Exons are nucleotide sequences that code for proteins, whereas introns are the non-coding regions. In RNA splicing, introns are removed and exons are bonded...
53.2K
Pre-mRNA Processing: RNA Splicing
5.6K
5.6K

