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Updated: Apr 23, 2026

Identification of MyoD Interactome Using Tandem Affinity Purification Coupled to Mass Spectrometry
Published on: May 17, 2016
The SWI/SNF subunit/tumor suppressor BAF47/INI1 is essential in cell cycle arrest upon skeletal muscle terminal
Véronique Joliot1, Ouardia Ait-Mohamed1, Valentine Battisti1
1Université Paris Diderot, Sorbonne Paris Cité, Centre Epigénétique et Destin Cellulaire, UMR7216, Centre National de la Recherche Scientifique CNRS, Université Paris Diderot, Paris, France.
Abstract:
Myogenic terminal differentiation is a well-orchestrated process starting with permanent cell cycle exit followed by muscle-specific genetic program activation. Individual SWI/SNF components have been involved in muscle differentiation. Here, we show that the master myogenic differentiation factor MyoD interacts with more than one SWI/SNF subunit, including the catalytic subunit BRG1, BAF53a and the tumor suppressor BAF47/INI1. Downregulation of each of these SWI/SNF subunits inhibits skeletal muscle terminal differentiation but, interestingly, at different differentiation steps and extents. BAF53a downregulation inhibits myotube formation but not the expression of early muscle-specific genes. BRG1 or BAF47 downregulation disrupt both proliferation and differentiation genetic programs expression. Interestingly, BRG1 and BAF47 are part of the SWI/SNF remodeling complex as well as the N-CoR-1 repressor complex in proliferating myoblasts. However, our data show that, upon myogenic differentiation, BAF47 shifts in favor of N-CoR-1 complex. Finally, BRG1 and BAF47 are well-known tumor suppressors but, strikingly, only BAF47 seems essential in the myoblasts irreversible cell cycle exit. Together, our data unravel differential roles for SWI/SNF subunits in muscle differentiation, with BAF47 playing a dual role both in the permanent cell cycle exit and in the regulation of muscle-specific genes.
Insights
The SWI/SNF complex subunits BRG1 and BAF47 are crucial for skeletal muscle differentiation and cell cycle exit. BAF47 plays a dual role in cell cycle exit and muscle gene regulation.
Area of Science:
- Muscle biology
- Cellular differentiation
- Epigenetics
Background:
- Myogenic terminal differentiation involves cell cycle exit and muscle gene activation.
- SWI/SNF complex components are implicated in muscle differentiation.
Purpose of the Study:
- To investigate the roles of SWI/SNF subunits (BRG1, BAF53a, BAF47) in myogenic terminal differentiation.
- To elucidate the interaction of MyoD with SWI/SNF subunits and their functions in muscle development.
Main Methods:
- Investigated the interaction between MyoD and SWI/SNF subunits.
- Analyzed the effects of downregulating SWI/SNF subunits on skeletal muscle differentiation.
- Examined the composition of SWI/SNF and N-CoR-1 complexes during myogenesis.
Main Results:
- Downregulation of BRG1, BAF53a, or BAF47 differentially inhibited skeletal muscle terminal differentiation.
- BAF53a downregulation affected myotube formation but not early gene expression.
- BRG1 and BAF47 downregulation disrupted both proliferation and differentiation gene programs.
- BAF47 shifted to the N-CoR-1 complex during differentiation.
- BAF47, but not BRG1, was essential for irreversible cell cycle exit in myoblasts.
Conclusions:
- SWI/SNF subunits exhibit differential roles in muscle differentiation.
- BAF47 plays a critical dual role in permanent cell cycle exit and muscle-specific gene regulation.
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