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Updated: Apr 23, 2026

Preparation of Mitochondria from Ovarian Cancer Tissues and Control Ovarian Tissues for Quantitative Proteomics Analysis
Published on: November 18, 2019
Quantitative proteomics analysis identifies mitochondria as therapeutic targets of multidrug-resistance in ovarian
Xiulan Chen1, Shasha Wei2, Ying Ma3
11. Key Laboratory of Protein and Peptide Pharmaceuticals & Laboratory of Proteomics, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China;
Abstract:
Doxorubicin is a widely used chemotherapeutic agent for the treatment of a variety of solid tumors. However, resistance to this anticancer drug is a major obstacle to the effective treatment of tumors. As mitochondria play important roles in cell life and death, we anticipate that mitochondria may be related to drug resistance. Here, stable isotope labeling by amino acids in cell culture (SILAC)-based quantitative proteomic strategy was applied to compare mitochondrial protein expression in doxorubicin sensitive OVCAR8 cells and its doxorubicin-resistant variant NCI_ADR/RES cells. A total of 2085 proteins were quantified, of which 122 proteins displayed significant changes in the NCI_ADR/RES cells. These proteins participated in a variety of cell processes including cell apoptosis, substance metabolism, transport, detoxification and drug metabolism. Then qRT-PCR and western blot were applied to validate the differentially expressed proteins quantified by SILAC. Further functional studies with RNAi demonstrated TOP1MT, a mitochondrial protein participated in DNA repair, was involved in doxorubicin resistance in NCI_ADR/RES cells. Besides the proteomic study, electron microscopy and fluorescence analysis also observed that mitochondrial morphology and localization were greatly altered in NCI_ADR/RES cells. Mitochondrial membrane potential was also decreased in NCI_ADR/RES cells. All these results indicate that mitochondrial function is impaired in doxorubicin-resistant cells and mitochondria play an important role in doxorubicin resistance. This research provides some new information about doxorubicin resistance, indicating that mitochondria could be therapeutic targets of doxorubicin resistance in ovarian cancer cells.
Insights
Mitochondria are crucial in doxorubicin resistance. Impaired mitochondrial function and altered protein expression, including TOP1MT, contribute to drug resistance in ovarian cancer cells, suggesting mitochondria as potential therapeutic targets.
Area of Science:
- Biochemistry
- Molecular Biology
- Cell Biology
Background:
- Doxorubicin is a key chemotherapy drug, but drug resistance limits its efficacy.
- Mitochondria are vital for cellular processes and may influence chemotherapy resistance.
Purpose of the Study:
- To investigate the role of mitochondria in doxorubicin resistance using proteomic analysis.
- To identify specific mitochondrial proteins and pathways involved in doxorubicin resistance in ovarian cancer cells.
Main Methods:
- Stable Isotope Labeling by Amino acids in Cell culture (SILAC)-based quantitative proteomics to compare mitochondrial proteins.
- Quantitative Real-Time PCR (qRT-PCR) and Western blot for validation.
- RNA interference (RNAi) for functional studies.
- Electron microscopy and fluorescence analysis for mitochondrial morphology and function.
Main Results:
- Over 2000 mitochondrial proteins were quantified, with 122 significantly altered in resistant cells.
- Differentially expressed proteins are involved in apoptosis, metabolism, transport, and drug detoxification.
- TOP1MT, a DNA repair protein, was identified as a key factor in doxorubicin resistance.
- Mitochondrial morphology, localization, and membrane potential were significantly altered in resistant cells.
Conclusions:
- Mitochondrial function is impaired in doxorubicin-resistant ovarian cancer cells.
- Mitochondria play a significant role in doxorubicin resistance.
- Targeting mitochondria may offer a novel therapeutic strategy for overcoming doxorubicin resistance in ovarian cancer.
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