Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Statgraphics01:10

Statgraphics

481
Statgraphics is a comprehensive statistical software suite designed for both basic and advanced data analysis. Originating in 1980 at Princeton University under Dr. Neil W. Polhemus, it was one of the pioneering tools for statistical computing on personal computers, with its public release in 1982 marking an early milestone in data science software. Over the years, it has evolved into a robust platform for data science, offering tools for regression analysis, ANOVA, multivariate statistics,...
481
Data Validation01:03

Data Validation

6.4K
Data validation is an essential part of a comprehensive assessment. Validation is confirming or verifying and opening the door to gathering more assessment data as it clarifies vague or unclear data. The process of checking and verifying the collected information is called data validation. The primary purpose of data validation is to ensure data is as free from error, bias, and misinterpretation as possible.
Nursing assessment guides are generally based on holistic models rather than medical...
6.4K
Data Validation01:15

Data Validation

3.7K
Method validation is a crucial process in analytical chemistry designed to confirm that a given method consistently produces reliable and high-quality results. This process is essential when a method is applied to different sample matrices or when procedural modifications are made, ensuring that the results meet acceptable standards across various applications.
Key parameters for method validation include:
3.7K
Visual System01:26

Visual System

2.3K
Light enters the eye through the cornea, a transparent, dome-shaped surface covering the surface of the eyeball that helps to direct and focus incoming light. This light is then channeled toward the pupil, an adjustable opening whose size is controlled by the iris. The iris, a pigmented muscle, regulates the amount of light entering the eye by contracting or dilating the pupil, thereby ensuring optimal light levels for clear vision.
Once through the pupil, the light passes through the lens, a...
2.3K
GIS Software, Hardware, and Sources of GIS Data01:23

GIS Software, Hardware, and Sources of GIS Data

1.0K
A Geographic Information System (GIS) combines specialized software and hardware to effectively manage, analyze, and present spatial and related data. GIS software includes critical functionalities such as a user interface for easy navigation, database management tools for handling spatial and attribute data, and data retrieval features for efficient access. Analytical tools transform raw data into insights, while display functions produce maps and reports in various formats for effective...
1.0K
Divergence and Stokes' Theorems01:06

Divergence and Stokes' Theorems

3.8K
The divergence and Stokes' theorems are a variation of Green's theorem in a higher dimension. They are also a generalization of the fundamental theorem of calculus. The divergence theorem and Stokes' theorem are in a way similar to each other; The divergence theorem relates to the dot product of a vector, while Stokes' theorem relates to the curl of a vector. Many applications in physics and engineering make use of the divergence and Stokes' theorems, enabling us to write...
3.8K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

New Growth, New Opportunities.

Journal of medical imaging (Bellingham, Wash.)·2025
Same author

Influence of early through late fusion on pancreas segmentation from imperfectly registered multimodal magnetic resonance imaging.

Journal of medical imaging (Bellingham, Wash.)·2025
Same author

White matter hyperintensities and relapse risk in late-life depression.

Journal of affective disorders·2025
Same author

Unsupervised discovery of clinical disease signatures using probabilistic independence.

Journal of biomedical informatics·2025
Same author

Multi-contrast computed tomography atlas of healthy pancreas with dense displacement sampling registration.

Journal of medical imaging (Bellingham, Wash.)·2025
Same author

The effect of Alzheimer's disease genetic factors on limbic white matter microstructure.

Alzheimer's & dementia : the journal of the Alzheimer's Association·2025
Same journal

Integration of the Java Image Science Toolkit with E-Science Platforms.

The insight journal·2025
Same journal

BioImage Suite: An integrated medical image analysis suite: An update.

The insight journal·2014
Same journal

Enabling ITK-based processing and 3D Slicer MRML scene management in ParaView.

The insight journal·2014
Same journal

Principal Components Analysis of Scalar, Vector, and Mesh Vertex Data.

The insight journal·2014
Same journal

Laplace Beltrami Filter on QuadEdge Meshes.

The insight journal·2013
Same journal

Adapting the ITK Registration Framework to Fit Parametric Image Models.

The insight journal·2012
See all related articles

Related Experiment Video

Updated: Apr 23, 2026

Inherent Dynamics Visualizer, an Interactive Application for Evaluating and Visualizing Outputs from a Gene Regulatory Network Inference Pipeline
10:44

Inherent Dynamics Visualizer, an Interactive Application for Evaluating and Visualizing Outputs from a Gene Regulatory Network Inference Pipeline

Published on: December 7, 2021

1.7K

Next Generation of the Java Image Science Toolkit (JIST): Visualization and Validation.

Bo Li1, Frederick Bryan2, Bennett A Landman3

  • 1Computer Science, Vanderbilt University, Nashville, TN, USA 37235.

The Insight Journal
|October 7, 2014
PubMed
Summary
This summary is machine-generated.

The Java Image Science Toolkit (JIST) has been updated to JIST-II, improving neuroimaging analysis with better visualization, stability, and quality control for processing pipelines.

Keywords:
JIST next generationcontinuous integrationfidelitymedical image analysisvisualization

More Related Videos

Integrative Toolkit to Analyze Cellular Signals: Forces, Motion, Morphology, and Fluorescence
14:55

Integrative Toolkit to Analyze Cellular Signals: Forces, Motion, Morphology, and Fluorescence

Published on: March 5, 2022

4.8K
Interactive and Visualized Online Experimentation System for Engineering Education and Research
08:35

Interactive and Visualized Online Experimentation System for Engineering Education and Research

Published on: November 24, 2021

2.3K

Related Experiment Videos

Last Updated: Apr 23, 2026

Inherent Dynamics Visualizer, an Interactive Application for Evaluating and Visualizing Outputs from a Gene Regulatory Network Inference Pipeline
10:44

Inherent Dynamics Visualizer, an Interactive Application for Evaluating and Visualizing Outputs from a Gene Regulatory Network Inference Pipeline

Published on: December 7, 2021

1.7K
Integrative Toolkit to Analyze Cellular Signals: Forces, Motion, Morphology, and Fluorescence
14:55

Integrative Toolkit to Analyze Cellular Signals: Forces, Motion, Morphology, and Fluorescence

Published on: March 5, 2022

4.8K
Interactive and Visualized Online Experimentation System for Engineering Education and Research
08:35

Interactive and Visualized Online Experimentation System for Engineering Education and Research

Published on: November 24, 2021

2.3K

Area of Science:

  • Medical imaging analysis
  • Neuroimaging
  • Bioinformatics

Background:

  • Modern medical imaging analysis relies on multi-step processing pipelines.
  • The Java Image Science Toolkit (JIST) provides a framework for creating these pipelines.
  • JIST has facilitated neuroimaging research but faces challenges in accessibility and stability.

Purpose of the Study:

  • To address key weaknesses in the traditional JIST (JIST-I) framework.
  • To introduce JIST-II, a next-generation framework for medical image analysis.
  • To enhance JIST's utility for researchers in building and managing processing pipelines.

Main Methods:

  • Implemented seamless data visualization within the JIST-II user interface.
  • Introduced continuous integration checks to ensure compilation stability and prevent framework fractures.
  • Developed functionality checks using continuous integration for nightly quality control and preservation of module performance.

Main Results:

  • JIST-II offers seamless data visualization, eliminating manual file location.
  • Nightly continuous integration checks ensure JIST-II's stability and prevent version conflicts.
  • Functionality checks and layout test cases in JIST-II guarantee module performance and result fidelity.

Conclusions:

  • JIST-II significantly enhances the JIST framework's fidelity and utility.
  • Researchers can now build, manage, and understand medical image analysis pipelines more robustly.
  • JIST-II promotes a more accessible and stable environment for neuroimaging research.