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On the calculation of internal forces in mechanically stressed polyatomic molecules
Stanislav M Avdoshenko1, Sai Sriharsha M Konda2, Dmitrii E Makarov1
1Institute for Computational Engineering and Sciences, University of Texas at Austin, Austin, Texas 78712, USA.
Defining internal forces in molecules under mechanical stress requires specifying coordinates. We show these forces depend on molecular geometry and reveal phenomena like force multiplication and catch-bonds.
Area of Science:
- Molecular Mechanics
- Computational Chemistry
- Materials Science
Background:
- Internal forces in molecules are crucial for understanding mechanical stress response.
- The many-body nature of intramolecular interactions complicates force definition.
- Previous methods lacked a universally applicable framework for defining and computing these forces.
Purpose of the Study:
- To establish a clear definition and computational method for internal forces in stressed molecules.
- To investigate the relationship between internal force magnitude and bond strength.
- To explore emergent phenomena arising from internal force analysis.
Main Methods:
- Developing a coordinate-dependent definition of internal forces.
- Utilizing the relationship F = ∂V/∂R, where F is force, V is potential energy, and R is bond length.
- Applying the method to toy models, small molecules, and a graphene sheet.
Main Results:
- Internal forces can be uniquely computed from molecular geometry using a defined set of coordinates.
- The magnitude of internal force in a bond does not always predict its mechanical strength.
- Force multiplication and catch-bond phenomena were observed and explained.
Conclusions:
- A robust method for defining and computing internal forces in molecules under mechanical stress has been presented.
- Internal force analysis provides deeper insights into molecular behavior under load than simple bond strength metrics.
- This framework aids in understanding complex mechanical responses and chemical reactivity modulation in materials.
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