Related Experiment Video
Updated: Apr 22, 2026

Probiotic Studies in Neonatal Mice Using Gavage
Published on: January 27, 2019
Why is initial bacterial colonization of the intestine important to infants' and children's health?
Pearl D Houghteling1, W Allan Walker
1Mucosal Immunology and Biology Research Center, Massachusetts General Hospital for Children, Charlestown.
Insights
Infant gut microbiome development is crucial for lifelong health. Factors like birth mode and feeding shape this critical window, impacting immunity and digestion.
Area of Science:
- Microbiology
- Immunology
- Gastroenterology
Background:
- Infant microbial colonization is a pivotal event during early development.
- This early colonization profoundly influences the maturation of the gastrointestinal tract and immune system.
- The infant microbiome serves as a foundation for the adult microbial community.
Purpose of the Study:
- To provide a comprehensive overview of factors influencing infant microbial colonization.
- To explore the downstream consequences of infant colonization on gastrointestinal health and disease.
- To examine potential therapeutic interventions for disrupted colonization.
Main Methods:
- Literature review of factors affecting infant microbial colonization.
- Analysis of the impact of birth mode, breastfeeding, and immune system modulation.
- Survey of outcomes related to immune education, barrier function, and metabolism.
- Examination of disease mechanisms and therapeutic strategies.
Main Results:
- Birth mode and breastfeeding significantly impact initial microbial inoculation.
- The developing immune system actively modulates the infant microbiome.
- Colonization timing influences neonatal immune system education, barrier function, and metabolism.
- Interactions between microbiome, genetics, and nutrition are critical.
Conclusions:
- Early life microbial colonization is a critical determinant of long-term gastrointestinal and immune health.
- Disruptions in infant colonization can lead to various diseases.
- Nutritional and microbial therapies show promise for managing disrupted colonization.
Abstract:
Microbial colonization of the infant occurs during a critical time window for immune and gastrointestinal development. Infant colonization sets the stage for the adult microbiome. This review is a broad survey of the factors affecting infant colonization and the downstream effects on gastrointestinal health and disease. Major topics affecting colonization include initial inoculation dependent on birth mode, the impact of breast-feeding, and inside-out modulation of the developing microbiome by the immune system. Major outcomes of colonization include the timing-dependent education of the neonatal immune system, which is interconnected with barrier function and metabolism. These all engage in further continuing cross-talk with the microbiome, genetics, and nutrition. This review also briefly examines mechanisms of disease resulting from disrupted colonization as well as nutritional and microbial therapies.
More Related Videos
Related Concept Videos
Development of the Oral Microbiota
Development of Human Microbiota
Anatomy of the Intestines
Small Intestines
The small intestine is an ~7 meter-long tube with an inner diameter of just 2.5 cm. Since most nutrients are absorbed here, the inner lining of the...
Introduction to the Human Microbiota
Bacterial Flora of the Large Intestine
The normal gut flora of the colon plays a critical role in generating essential vitamins such as vitamins K, B5, and B7.
Colonisation of Pathogens

