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Related Concept Videos

The Proteasome02:18

The Proteasome

7.7K
Eukaryotic cells can degrade proteins through several pathways. One of the most important amongst these is the ubiquitin-proteasome pathway. It helps the cell eliminate the misfolded, damaged, or unwarranted cytoplasmic proteins in a highly specific manner.
In this pathway, the target proteins are first tagged with small proteins called ubiquitin. A series of enzymes carry out the ubiquitination of the target proteins - E1 (ubiquitin-activating enzyme), E2 (ubiquitin-conjugating enzyme), and E3...
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The Proteasome01:13

The Proteasome

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Eukaryotic cells can degrade proteins through several pathways. One of the most important among these is the ubiquitin-proteasome pathway. It helps the cell eliminate the misfolded, damaged, or unwarranted cytoplasmic proteins in a highly specific manner.
In this pathway, the target proteins are first tagged with small proteins called ubiquitin. This involves participation of a series of enzymes including— E1 (ubiquitin-activating enzyme), E2 (ubiquitin-conjugating enzyme), and E3...
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The Proteasome02:18

The Proteasome

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The Proteasome Structure01:17

The Proteasome Structure

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The ubiquitin-proteasome pathway is a well-known mechanism utilized by eukaryotic cells to remove cytoplasmic proteins that are misfolded, damaged, or no longer needed. In this pathway, the protein that needs to be eliminated undergoes a process called ubiquitination, where a chain of ubiquitin molecules is attached to the 48th lysine residue of the target protein. This ubiquitin modification helps the proteasome distinguish between a target protein and a healthy protein.
The proteasome is an...
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Caspases01:24

Caspases

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Caspase, a family of cysteine proteases, serve as effectors in apoptosis. The ced3 gene in C.elegans was first identified to be involved in apoptosis. This gene encodes the ced-3 caspase that is similar to the interleukin-1-beta converting enzyme or ICE in mammals. In addition to apoptosis, caspases also function in the inflammatory response. Inflammatory caspases are essential in activating pro-inflammatory cytokines that recruit immune cells and block the replication of pathogens inside...
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Protein Import into the Peroxisomes01:27

Protein Import into the Peroxisomes

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Cells contain membrane-bound organelles called peroxisomes that oxidize organic molecules by transferring hydrogen atoms to oxygen, producing hydrogen peroxide. Peroxisomes enzymatically convert the released hydrogen peroxide into water and oxygen.
Peroxisomal Protein Import:
Peroxisomes lack the genetic machinery required to code for their own proteins. Hence, most peroxisomal membrane, lumenal and transmembrane proteins are synthesized in the cytoplasm or ER and transported to the peroxisome...
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Related Experiment Video

Updated: Apr 22, 2026

Quantitative FRET Förster Resonance Energy Transfer Analysis for SENP1 Protease Kinetics Determination
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Quantitative FRET Förster Resonance Energy Transfer Analysis for SENP1 Protease Kinetics Determination

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SUMO-specific proteases/isopeptidases: SENPs and beyond.

Arnab Nayak, Stefan Müller

    Genome Biology
    |October 16, 2014
    PubMed
    Summary

    SUMO proteases, also known as SUMO isopeptidases, are enzymes crucial for cellular regulation. This review covers their evolution, structure, function, and links to human diseases.

    Area of Science:

    • Biochemistry
    • Molecular Biology
    • Cell Biology

    Background:

    • SUMOylation is a vital post-translational modification regulating protein function.
    • SUMO proteases (SUMO isopeptidases) are essential for reversing SUMOylation.
    • Dysregulation of SUMOylation and SUMO proteases is implicated in various pathologies.

    Purpose of the Study:

    • To provide a comprehensive overview of SUMO proteases.
    • To elucidate their evolutionary origins, structural characteristics, and cellular localization.
    • To discuss their diverse biological functions and relevance to human diseases.

    Main Methods:

    • Literature review and synthesis of existing research.
    • Comparative analysis of SUMO protease families across species.

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  • Integration of structural, functional, and disease-related data.
  • Main Results:

    • SUMO proteases exhibit diverse evolutionary trajectories and structural folds.
    • They are localized in various subcellular compartments, including the nucleus and cytoplasm.
    • Their functions span gene expression, DNA repair, and signal transduction.

    Conclusions:

    • SUMO proteases play critical roles in maintaining cellular homeostasis.
    • Understanding their biology is key to developing therapeutic strategies for SUMOylation-related diseases.
    • Further research into SUMO protease mechanisms will uncover new biological insights.