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Published on: June 8, 2017
Machine learning based compartment models with permeability for white matter microstructure imaging
Abstract:
The residence time Ti of water inside axons is an important biomarker for white matter pathologies of the human central nervous system, as myelin damage is hypothesised to increase axonal permeability, and thus reduce Ti. Diffusion-weighted (DW) MRI is potentially able to measure Ti as it is sensitive to the average displacement of water molecules in tissue. However, previous work addressing this has been hampered by a lack of both sensitive data and accurate mathematical models. We address the latter problem by constructing a computational model using Monte Carlo simulations and machine learning in order to learn a mapping between features derived from DW MR signals and ground truth microstructure parameters. We test our method using simulated and in vivo human brain data. Simulation results show that our approach provides a marked improvement over the most widely used mathematical model. The trained model also predicts sensible microstructure parameters from in vivo human brain data, matching values of Ti found in the literature.
Insights
This study introduces a new computational model using Monte Carlo simulations and machine learning to accurately measure water residence time (Ti) in axons. This advancement improves the detection of white matter pathologies using diffusion-weighted MRI.
Area of Science:
- Neuroimaging
- Computational Neuroscience
- Biomarker Discovery
Background:
- Axonal water residence time (Ti) is a key biomarker for central nervous system white matter pathologies.
- Myelin damage may increase axonal permeability, reducing Ti.
- Current diffusion-weighted (DW) MRI methods struggle to accurately measure Ti due to data limitations and model inaccuracies.
Purpose of the Study:
- To develop an accurate computational model for measuring axonal water residence time (Ti) using DW MRI.
- To improve the analysis of white matter pathologies by enhancing Ti measurement accuracy.
Main Methods:
- Developed a computational model integrating Monte Carlo simulations and machine learning.
- Created a mapping between DW MR signal features and ground truth microstructure parameters.
- Validated the model using simulated and in vivo human brain data.
Main Results:
- The novel computational model significantly outperforms the most widely used mathematical model for Ti measurement.
- The trained model accurately predicts microstructure parameters from in vivo human brain data.
- Predicted Ti values align with previously reported literature findings.
Conclusions:
- The developed Monte Carlo and machine learning model offers a marked improvement for measuring axonal water residence time (Ti).
- This approach enhances the potential of diffusion-weighted MRI for diagnosing white matter pathologies.
- The method shows promise for clinical applications in neuroscience.
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