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Updated: Apr 21, 2026

Spatial Separation of Molecular Conformers and Clusters
Published on: January 9, 2014
Accelerating electrostatic pair methods on graphical processing units to study molecules in supercritical carbon
John A Baker1, Jonathan D Hirst
1School of Chemistry, University of Nottingham, University Park, Nottingham, NG7 2RD, UK. Jonathan.Hirst@nottingham.ac.uk.
Abstract:
Traditionally, electrostatic interactions are modelled using Ewald techniques, which provide a good approximation, but are poorly suited to GPU architectures. We use the GPU versions of the LAMMPS MD package to implement and assess the Wolf summation method. We compute transport and structural properties of pure carbon dioxide and mixtures of carbon dioxide with either methane or difluoromethane. The diffusion of pure carbon dioxide is indistinguishable when using the Wolf summation method instead of PPPM on GPUs. The optimum value of the potential damping parameter, α, is 0.075. We observe a decrease in accuracy when the system polarity increases, yet the method is robust for mildly polar systems. We anticipate the method can be used for a number of techniques, and applied to a variety of systems. Substitution of PPPM can yield a two-fold decrease in the wall-clock time.
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