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Serum microRNA is a promising biomarker for osteogenesis imperfecta
Ziqiang Wang1, Yanqin Lu1, Xiumei Zhang1
1Shandong Medicinal Biotechnology Center, Key Laboratory for Biotech-Drugs Ministry of Health, Key Laboratory for Rare Disease of Shandong Province, Shandong Academy of Medical Sciences, Jinan University Shandong Academy of Medical Sciences College of Life Science and Medicine, Ji'nan, Shandong, China;
Abstract:
The purpose of our study was to screen preliminary differential expression bone-related microRNAs (miRNAs) in serum of patients with osteogenesis imperfacta and to clarify whether serum microRNA is a promising biomarker for osteogenesis imperfecta. geNorm and several other programes were performed to select suitable reference genes for quantitative detection of serum miRNAs from 6 candidate control genes. With geometric averaging of selected reference genes as a normalization factor, fluorescence-based quantitative real-time reverse transcriptase-polymerase chain reaction (qRT-PCR) was used to detect expression levels of more than 100 bone-related miRNAs obtained by means of miRanda, Targetscan and Pictar software calculations and reading the literature. Through analysis of expression stability and pairwise variations, all 6 candidate reference genes had a stable expression level in serum of 8 healthy controls and 8 patients with different characrteristics, and the optimal number of reference genes for normalization was 4 (snRNAU6, miR-92a, miR-16, and Let-7a). For further validation, the expression stability of 4 reference genes remained steady in serum of another 8 healthy controls and 16 patients with osteogenesis imperfecta (M < 1.5). When normalized using multiple control genes, 11 bone-related miRNAs showed differential expression in serum of 8 osteogenesis imperfecta patients compared with 8 healthy controls. In conclusion, we identified snRNAU6, miR-92a, miR-16, and Let-7a as an internal reference gene group for qRT-PCR normalization and screening results revealed that there existed many differential expression bone-related miRNAs in serum of patients with osteogenesis imperfecta compared with healthy controls, and that these miRNAs had potential to be biomarkers for serologic tests and diagnosis of osteogenesis imperfecta with analysis of bioinformation.
Insights
This study identified stable reference genes for microRNA (miRNA) analysis in osteogenesis imperfecta patients. Researchers found multiple bone-related miRNAs differentially expressed in patient serum, suggesting their potential as diagnostic biomarkers.
Area of Science:
- Biochemistry
- Genetics
- Molecular Biology
Background:
- Osteogenesis imperfecta (OI) is a genetic disorder characterized by brittle bones.
- Identifying reliable biomarkers for OI diagnosis and monitoring is crucial.
- MicroRNAs (miRNAs) are small non-coding RNAs with regulatory roles, implicated in various diseases.
Purpose of the Study:
- To screen for differentially expressed bone-related microRNAs (miRNAs) in the serum of osteogenesis imperfecta patients.
- To evaluate the potential of serum miRNAs as biomarkers for osteogenesis imperfecta.
- To establish suitable reference genes for accurate miRNA quantification in OI serum samples.
Main Methods:
- Selection of optimal reference genes for quantitative real-time reverse transcriptase-polymerase chain reaction (qRT-PCR) using geNorm and other programs.
- Quantification of over 100 bone-related miRNAs using qRT-PCR after normalization with validated reference genes.
- Bioinformatic analysis of miRNA expression data from 8 OI patients and 8 healthy controls.
Main Results:
- snRNAU6, miR-92a, miR-16, and Let-7a were identified as a stable reference gene group for qRT-PCR normalization in OI serum.
- Expression stability of these 4 reference genes was validated in a larger cohort (16 OI patients, 8 healthy controls).
- Eleven bone-related miRNAs exhibited differential expression in the serum of OI patients compared to healthy controls.
Conclusions:
- A reliable set of reference genes (snRNAU6, miR-92a, miR-16, Let-7a) was established for serum miRNA analysis in osteogenesis imperfecta.
- The study identified numerous differentially expressed bone-related miRNAs in OI patient serum.
- These differentially expressed miRNAs hold significant potential as biomarkers for serologic tests and the diagnosis of osteogenesis imperfecta.
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