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Updated: Apr 21, 2026

Precision Measurements and Parametric Models of Vertebral Endplates
Published on: September 17, 2019
A statistical shape model of the human second cervical vertebra.
Marine Clogenson1, John M Duff, Marcel Luethi
1École Polytechnique Fédérale de Lausanne, Instant-Lab, Rue de la Maladière 71b, 2000, Neuchâtel, Switzerland, marine.clogenson@epfl.ch.
This study presents a statistical shape model (SSM) for the second cervical vertebra (C2), improving 3D model development and segmentation. The C2 SSM is now available for the scientific community to aid in surgical planning.
Area of Science:
- Medical Imaging
- Biomedical Engineering
- Computational Anatomy
Background:
- Statistical shape models (SSMs) are crucial for efficient 3D model development and segmentation.
- The second cervical vertebra (C2) presents morphological complexity and population variability, posing challenges for model creation.
Purpose of the Study:
- To describe the generation of a statistical shape model (SSM) for the second cervical vertebra (C2).
- To provide the C2 SSM for public use by the scientific community.
- To address the challenges of C2 morphological complexity and variability.
Main Methods:
- Utilized manually segmented anonymized patient CT scans.
- Employed Procrustes alignment for surface model registration.
- Applied Gaussian process and Principal Component Analysis (PCA) for model fitting and variability inclusion.
Main Results:
- Generated an SSM using 92 CT scans.
- Evaluated the SSM for specificity, compactness, and generalization.
- Made the C2 SSM freely available in Slicer with a visualization module.
Conclusions:
- The developed SSM effectively represents C2 shape variability.
- The SSM facilitates semi-automatic segmentation and 3D model generation.
- This tool is expected to significantly benefit surgical planning.
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