Related Experiment Video
Updated: Apr 21, 2026

Quantification of Cytosolic vs. Vacuolar Salmonella in Primary Macrophages by Differential Permeabilization
Published on: July 28, 2015
Autophagy and checkpoints for intracellular pathogen defense
Geraldine L C Paulus1, Ramnik J Xavier
1aBroad Institute of Harvard University and Massachusetts Institute of Technology, Cambridge bGastrointestinal Unit, Center for the Study of Inflammatory Bowel Disease, and Center for Computational and Integrative Biology, Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Autophagy and autophagy-related genes are vital for cellular defense against pathogens. These processes, including xenophagy and LC3-associated phagocytosis, are crucial for pathogen clearance and cell survival.
Area of Science:
- Cellular Biology
- Immunology
- Microbiology
Background:
- Autophagy is a key cellular process involved in intracellular defense.
- Xenophagy specifically targets intracellular pathogens for degradation.
- Autophagy-related genes (ATGs) underpin distinct defense mechanisms.
Purpose of the Study:
- To review autophagy-dependent intracellular defense mechanisms.
- To explore pathogen strategies for evading these defenses.
- To examine the interplay between autophagy and cell death.
Main Methods:
- Literature review of autophagy and intracellular pathogen defense.
- Analysis of pathogen evasion tactics.
- Examination of crosstalk with cell death pathways.
Main Results:
- Autophagy-related proteins are central to xenophagy and LC3-associated phagocytosis.
- Pathogens employ diverse strategies to resist autophagy-mediated immunity.
- Pathogen load influences cell survival versus cell death decisions.
- LC3-associated phagocytosis is critical for clearing dead cells.
Conclusions:
- Autophagy-dependent pathways are essential for combating a wide array of pathogens.
- Autophagy-related gene-dependent pathways are critical for intracellular immunity.
Related Concept Videos
Autophagy
An autophagic pathway consists of a series of signaling events activated in response to diverse stress and physiological conditions such as food deprivation,...
Cellular Injury V: Apoptosis and Autophagy
Delivery Pathways to the Lysosome
Endocytosis
In endocytosis, the cell membrane takes up macromolecules and particles from the surrounding medium. Clathrin-mediated...
Immune Surveillance by NK Cells and Phagocytes
Natural Killer Cells: The Fast Responders
NK cells are large granular lymphocytes found in the blood and lymphatic system. These...
Cells of the Innate Immune Response
Phagocytes
Phagocytes police the peripheral tissues by removing cellular debris and responding to the invasion of foreign substances or pathogens. Many phagocytes attack and remove microorganisms even before lymphocytes detect them. The human body has two general...
Defense Against Bacterial Pathogens
Phagocytes
Phagocytes are the frontline soldiers of the immune system. They include neutrophils and macrophages. Neutrophils are the most abundant type of white blood cell and are quickly mobilized to the site of infection. Macrophages are larger cells that patrol...

