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Oncogenic Gene Fusion Detection Using Anchored Multiplex Polymerase Chain Reaction Followed by Next Generation Sequencing
Published on: July 5, 2019
Saliva as a sampling source for the detection of leukemic fusion transcripts
Dongmei Chen1,2, Najie Song3,4, Runfang Ni5,6
1State Key Laboratory of Cellular Stress Biology, State Key Laboratory of Molecular Vaccinology and Molecular Diagnostics, Engineering Research Centre of Molecular Diagnostics, Ministry of Education, School of Life Sciences, Xiamen University, Xiamen, Fujian, 361102, China. dmchen@stu.xmu.edu.cn.
Saliva RNA can be stably stored at room temperature for at least four weeks. This study confirms saliva is a reliable source for detecting leukemic fusion transcripts, matching bone marrow results.
Area of Science:
- Molecular Diagnostics
- Biomarker Discovery
- Genomics
Background:
- Saliva is a valuable source for clinical diagnosis and therapeutic drug monitoring.
- Oral disease diagnosis and monitoring are key applications for saliva analysis.
- Investigating novel applications of saliva in disease detection is ongoing.
Purpose of the Study:
- To determine if saliva RNA can be stably stored at room temperature.
- To assess saliva as a convenient source for detecting fusion transcripts in leukemia patients.
- To compare saliva-based detection of fusion transcripts with bone marrow analysis.
Main Methods:
- Development of a specialized Saliva RNA tube for room temperature storage.
- Cross-sectional diagnostic study design.
- Detection of leukemic fusion transcripts in whole saliva and comparison with bone marrow samples from leukemia patients and healthy controls.
Main Results:
- Stable detection of human gene transcripts in whole saliva stored at room temperature for at least four weeks.
- Concordant detection of leukemic fusion transcripts between saliva and bone marrow samples.
- Absence of detected fusion transcripts in healthy volunteers' saliva samples.
Conclusions:
- Human whole saliva is a reliable and convenient sampling source for detecting leukemic fusions.
- The developed Saliva RNA tube enables stable room temperature storage of saliva for molecular analysis.
- Saliva analysis offers a promising non-invasive alternative for leukemia diagnostics.
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