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Microbiota Analysis Using Two-step PCR and Next-generation 16S rRNA Gene Sequencing
Published on: October 15, 2019
Severity of atopic disease inversely correlates with intestinal microbiota diversity and butyrate-producing bacteria
L Nylund1, M Nermes, E Isolauri
1Functional Foods Forum, University of Turku, Turku, Finland; Division of Microbiology and Epidemiology, Department of Veterinary Biosciences, University of Helsinki, Helsinki, Finland.
Insights
High gut microbiota diversity and butyrate-producing bacteria are linked to milder eczema in infants. Improvements in eczema severity correlated with increased microbiota diversity and specific beneficial bacteria over three months.
Area of Science:
- Microbiology
- Dermatology
- Pediatrics
Background:
- Contradictory findings exist regarding the relationship between early childhood microbiota and atopic diseases.
- Both decreased and increased gut microbiota diversity have been linked to atopic eczema.
Purpose of the Study:
- To characterize intestinal microbiota signatures associated with eczema severity in 6-month-old infants.
- To assess changes in gut microbiota composition related to eczema improvement over a 3-month follow-up period.
Main Methods:
- Correlation analysis between eczema severity and gut microbiota diversity and abundance of butyrate-producing bacteria.
- Longitudinal assessment of changes in microbiota composition and eczema scores over three months.
Main Results:
- Eczema severity inversely correlated with microbiota diversity (r = -0.54, P = 0.002) and butyrate-producing bacteria abundance (r = -0.52, P = 0.005).
- Over 3 months, microbiota diversity increased (P < 0.001) and eczema severity decreased (P < 0.001).
- Eczema improvement coincided with an increase in Coprococcus eutactus, a butyrate-producing bacterium (r = -0.59, P = 0.02).
Conclusions:
- Higher gut microbiota diversity and abundance of butyrate-producing bacteria are associated with milder infant eczema.
- These microbial characteristics may play a role in alleviating atopic eczema symptoms.
- Gut microbiota composition changes are linked to clinical improvement in infant eczema.
Abstract:
The reports on atopic diseases and microbiota in early childhood remain contradictory, and both decreased and increased microbiota diversity have been associated with atopic eczema. In this study, the intestinal microbiota signatures associated with the severity of eczema in 6-month-old infants were characterized. Further, the changes in intestinal microbiota composition related to the improvement of this disease 3 months later were assessed. The severity of eczema correlated inversely with microbiota diversity (r = -0.54, P = 0.002) and with the abundance of butyrate-producing bacteria (r = -0.52, P = 0.005). During the 3-month follow-up, microbiota diversity increased (P < 0.001) and scoring atopic dermatitis values decreased (P < 0.001) in all infants. This decrease coincided with the increase in bacteria related to butyrate-producing Coprococcus eutactus (r = -0.59, P = 0.02). In conclusion, the high diversity of microbiota and high abundance of butyrate-producing bacteria were associated with milder eczema, thus suggesting they have a role in alleviating symptoms of atopic eczema.
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