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Updated: Apr 20, 2026

Nanomechanics of Drug-target Interactions and Antibacterial Resistance Detection
Published on: October 25, 2013
Effect of vancomycin on the proteome of the multiresistant Enterococcus faecium SU18 strain
Sónia Ramos1, Ingrid Chafsey2, Nuno Silva3
1Institute for Biotechnology and Bioengineering, Centre for Genomics and Biotechnology, University of Trás-os-Montes and Alto Douro, Vila Real, Portugal; Department of Genetics and Biotechnology, University of Trás-os-Montes and Alto Douro, Vila Real, Portugal; Centre for Animal and Veterinary Science, University of Trás-os-Montes and Alto Douro, Vila Real, Portugal; Department of Veterinary Science, University of Trás-os-Montes and Alto Douro, Vila Real, Portugal.
Abstract:
Enterococci are not highly pathogenic bacteria, but the incidence of vancomycin resistance among clinical isolates of this microbial group is steadily increasing, posing a threat to public health. Vancomycin-resistant enterococci are currently some of the most recalcitrant hospital-associated pathogens against which new therapies are urgently needed. To understand the molecular mechanisms of bacterial resistance to glycopeptides, we obtained proteomic profiles of the vancomycin-resistant Enterococcus faecium SU18 strain treated with and without vancomycin. Fourteen proteins were differentially expressed in SU18, seven of which were up-regulated and seven down-regulated. Proteins involved in the vancomycin resistance mechanism, such as the VanA protein, VanA ligase, VanR and D-Ala-D-Ala dipeptidase, were up-regulated in the presence of vancomycin, while metabolism-related proteins, such as triosephosphate isomerase, guanine monophosphate synthase and glyceraldehyde-3-phosphate dehydrogenase were down-regulated. Overall the compensatory response of SU18 to antibiotics is to alter expression of proteins related to antibiotic resistance, cell wall formation and energy metabolism. Some of the differentially expressed proteins might enhance antimicrobial activity and are now being investigated as potential therapeutic drug targets in other pathogenic bacteria.
Biological Significance:
This study highlights the power of proteomics in the study of differential protein expression in a multiresistant Enterococcus faecium strain when subjected to vancomycin stress.
Insights
Vancomycin resistance in Enterococcus faecium is increasing. Proteomics revealed key protein changes, including up-regulation of resistance proteins and down-regulation of metabolism proteins, offering potential new therapeutic targets.
Area of Science:
- Microbiology
- Molecular Biology
- Proteomics
Background:
- Enterococci are a growing public health threat due to increasing vancomycin resistance.
- Vancomycin-resistant Enterococcus faecium (VRE) is a difficult-to-treat hospital-associated pathogen.
- New therapeutic strategies are urgently needed to combat VRE infections.
Purpose of the Study:
- To investigate the molecular mechanisms of vancomycin resistance in Enterococcus faecium.
- To identify differentially expressed proteins in a vancomycin-resistant strain under vancomycin stress.
- To explore potential new drug targets for antimicrobial therapies.
Main Methods:
- Proteomic profiling of the vancomycin-resistant Enterococcus faecium SU18 strain.
- Comparative analysis of protein expression with and without vancomycin treatment.
- Identification of up-regulated and down-regulated proteins.
Main Results:
- Fourteen proteins were differentially expressed in SU18 under vancomycin stress.
- Proteins involved in vancomycin resistance (e.g., VanA, VanR) were up-regulated.
- Metabolism-related proteins (e.g., triosephosphate isomerase) were down-regulated.
- The compensatory response involves alterations in antibiotic resistance, cell wall formation, and energy metabolism proteins.
Conclusions:
- Proteomics effectively revealed differential protein expression in multiresistant Enterococcus faecium.
- Understanding these protein expression changes is crucial for developing new VRE therapies.
- Some differentially expressed proteins represent promising targets for novel antimicrobial agents.
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