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Development and validation of consensus clustering-based framework for brain segmentation using resting fMRI.

Srikanth Ryali1, Tianwen Chen1, Aarthi Padmanabhan1

  • 1Department of Psychiatry & Behavioral Sciences, Stanford University School of Medicine, Stanford, CA 94305, United States.

Journal of Neuroscience Methods
|December 3, 2014
PubMed
Summary
This summary is machine-generated.

This study introduces a new consensus clustering framework (CC-EAC) to accurately segment brain regions using resting-state fMRI. The method reliably identifies functional subdivisions, overcoming limitations of existing clustering algorithms.

Keywords:
Consensus clusteringData clusteringParcellationResting-state fMRISegmentation

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Area of Science:

  • Neuroimaging
  • Computational Neuroscience
  • Data Science

Background:

  • Resting-state functional magnetic resonance imaging (rs-fMRI) is widely used for brain region segmentation.
  • Current clustering methods are sensitive to algorithm choice, initialization, and cluster number determination.

Purpose of the Study:

  • To develop a robust framework for brain region segmentation using rs-fMRI.
  • To address the sensitivity of clustering methods to algorithmic parameters and initialization.

Main Methods:

  • A novel consensus clustering evidence accumulation (CC-EAC) framework was developed.
  • Combined multiple clustering algorithms (K-means, hierarchical, spectral) and evaluated objective criteria for optimal cluster number selection.
  • Extensive computer simulations and experimental rs-fMRI data were used.

Main Results:

  • The CC-EAC framework, using K-means and hierarchical clustering with the probabilistic Rand index, accurately identified the number of clusters in simulated data.
  • Reliably detected functional subdivisions in key brain regions including the supplementary motor area, insula, intraparietal sulcus, angular gyrus, and striatum in experimental rs-fMRI data.

Conclusions:

  • The proposed CC-EAC framework offers a robust method for brain region segmentation using rs-fMRI.
  • It accurately determines stable functional clusters and is resilient to initialization and parameter choices, outperforming conventional approaches.