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CORM: An R Package Implementing the Clustering of Regression Models Method for Gene Clustering
1Department of Epidemiology and Biostatistics, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Cancer Informatics
|December 3, 2014
Summary
We introduce a new R package for clustering regression models (CORM) to group genes based on expression data. This tool aids in analyzing gene expression patterns and is available for free.
Area of Science:
- Bioinformatics
- Computational Biology
- Statistical Genetics
Background:
- Gene expression data analysis is crucial for understanding biological processes.
- Clustering methods are widely used to identify patterns in high-dimensional data.
- Existing methods may not fully capture complex relationships in gene expression.
Purpose of the Study:
- To introduce a novel R package for gene expression data clustering.
- To implement the clustering of regression models (CORM) method.
- To provide a user-friendly tool for gene expression analysis.
Main Methods:
- Development of an R package implementing the CORM method.
- Utilizing gene expression datasets for demonstration.
- Illustrating the functionality of each clustering algorithm within the package.
Main Results:
- A new R package, CORM, is now available.
- The package facilitates the clustering of genes based on regression models.
- Examples demonstrate the practical application of the package's functions.
Conclusions:
- The CORM R package offers a new approach to gene expression data clustering.
- The package provides accessible tools for researchers in bioinformatics and computational biology.
- Availability on CRAN ensures widespread adoption and use.
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