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Updated: Apr 20, 2026

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An Optimized Single-Molecule Pull-Down Assay for Quantification of Protein Phosphorylation
Published on: June 6, 2022
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Stoichiometry and assembly of mTOR complexes revealed by single-molecule pulldown
Ankur Jain1, Edwin Arauz2, Vasudha Aggarwal1
1Center for Biophysics and Computational Biology, Institute for Genomic Biology.
Summary
The mammalian target of rapamycin (mTOR) kinase regulates cell processes. New research reveals mTORC1 and mTORC2 complexes likely form homodimers through multiple subunits, offering insights into mTOR signaling and disease.
Area of Science:
- Cellular Biology
- Molecular Biology
- Biochemistry
Background:
- The mammalian target of rapamycin (mTOR) kinase is a crucial regulator of cellular, developmental, and metabolic processes.
- Dysregulation of mTOR signaling is linked to diseases like cancer and diabetes.
- The molecular mechanisms of mTOR complex (mTORC) assembly and oligomerization remain largely unknown.
Purpose of the Study:
- To investigate the stoichiometry and assembly of mTORC1 and mTORC2 complexes.
- To elucidate the oligomeric state of mTORCs using a novel single-molecule approach.
- To understand how physiological conditions and drug treatments affect mTORC assembly.
Main Methods:
- Utilized the single-molecule pulldown (SiMPull) assay, combining pulldown techniques with single-molecule fluorescence microscopy.
- Validated the SiMPull assay with mTORC1, confirming its previously reported dimeric assembly.
- Applied SiMPull to analyze the stoichiometry and assembly of mTORC2 components.
Main Results:
- mTORC2 major components exist in two copies per complex, indicating homodimeric assembly.
- Individual mTORC subunits are monomeric when free, with dimerization arising from multiple subunits forming a composite surface.
- Nutrient or energy stress did not alter mTORC stoichiometry, while rapamycin transiently produced monomeric mTORC1 before complex disruption, leaving mTORC2 unaffected.
Conclusions:
- mTORC1 and mTORC2 likely assemble as homodimers through interactions involving multiple subunits.
- SiMPull assay effectively distinguishes complex disassembly from stoichiometry changes.
- These findings provide critical insights into mTORC assembly, potentially guiding future therapeutic strategies.

