Related Experiment Video
Updated: Apr 19, 2026

Detection of Alternative Splicing During Epithelial-Mesenchymal Transition
Published on: October 9, 2014
Splicing factor 3b subunit 1 (Sf3b1) haploinsufficient mice display features of low risk Myelodysplastic syndromes
Valeria Visconte1, Ali Tabarroki2, Li Zhang3
1Department of Translational Hematology and Oncology Research, Taussig Cancer Institute, Cleveland Clinic, 9500 Euclid Avenue R40, Cleveland, OH, USA, 44195. visconv@ccf.org.
Background:
The presence of somatic mutations in splicing factor 3b subunit 1 (SF3B1) in patients with Myelodysplastic syndromes with ring sideroblasts (MDS-RS) highlights the importance of the RNA-splicing machinery in MDS. We previously reported the presence of bone marrow (BM) RS in Sf3b1 heterozygous (Sf3b1 (+/-)) mice which are rarely found in mouse models of MDS. Sf3b1 (+/-) mice were originally engineered to study the interaction between polycomb genes and other proteins.
Methods:
We used routine blood tests and histopathologic analysis of BM, spleen, and liver to evaluate the hematologic and morphologic characteristics of Sf3b1 (+/-) mice in the context of MDS by comparing the long term follow-up (15 months) of Sf3b1 (+/-) and Sf3b1 (+/+) mice. We then performed a comprehensive RNA-sequencing analysis to evaluate the transcriptome of BM cells from Sf3b1 (+/-) and Sf3b1 (+/+) mice.
Results:
Sf3b1 (+/-) exhibited macrocytic anemia (MCV: 49.5 ± 1.6 vs 47.2 ± 1.4; Hgb: 5.5 ± 1.7 vs 7.2 ± 1.0) and thrombocytosis (PLTs: 911.4 ± 212.1 vs 878.4 ± 240.9) compared to Sf3b1 (+/+) mice. BM analysis showed dyserythropoiesis and occasional RS in Sf3b1 (+/-) mice. The splenic architecture showed increased megakaryocytes with hyperchromatic nuclei, and evidence of extramedullary hematopoiesis. RNA-sequencing showed higher expression of a gene set containing Jak2 in Sf3b1 (+/-) compared to Sf3b1 (+/+).
Conclusions:
Our study indicates that Sf3b1 (+/-) mice manifest features of low risk MDS-RS and may be relevant for preclinical therapeutic studies.
Insights
Splicing factor 3b subunit 1 (SF3B1) mutations are key in Myelodysplastic syndromes with ring sideroblasts (MDS-RS). Sf3b1 (+/-) mice show low-risk MDS-RS features, making them valuable for preclinical studies.
Area of Science:
- Hematology
- Genetics
- Molecular Biology
Background:
- Somatic mutations in SF3B1 are implicated in MDS-RS.
- Sf3b1 heterozygous (Sf3b1 (+/-)) mice exhibit bone marrow ring sideroblasts (RS), a rare finding in MDS mouse models.
- These mice were initially developed to study polycomb gene interactions.
Purpose of the Study:
- To evaluate the hematologic and morphologic characteristics of Sf3b1 (+/-) mice.
- To determine the relevance of Sf3b1 (+/-) mice as a model for MDS-RS.
- To investigate the transcriptome of bone marrow cells in Sf3b1 (+/-) mice.
Main Methods:
- Long-term follow-up (15 months) comparing Sf3b1 (+/-) and Sf3b1 (+/+) mice.
- Routine blood tests and histopathologic analysis of bone marrow, spleen, and liver.
- Comprehensive RNA-sequencing of bone marrow cells.
Main Results:
- Sf3b1 (+/-) mice displayed macrocytic anemia and thrombocytosis compared to controls.
- Bone marrow analysis revealed dyserythropoiesis and occasional RS.
- RNA-sequencing indicated increased expression of Jak2-related genes in Sf3b1 (+/-) mice.
Conclusions:
- Sf3b1 (+/-) mice exhibit key features of low-risk MDS-RS.
- This mouse model is potentially relevant for preclinical therapeutic investigations in MDS-RS.
Related Concept Videos
RNA Splicing
Alternative RNA Splicing
There are five types of alternative RNA splicing that vary in the ways the pre-mRNA segments are removed or retained in the mature mRNA. The first...

