Ab initio study of guanine damage by hydroxyl radical
Galina M Chaban1, Dunyou Wang, Winifred M Huo
1NASA Ames Research Center , Mail Stop 258-1, P.O. Box 1, Moffett Field, California 94035-0001, United States.
Abstract:
Multiconfigurational ab initio methods are used in this study to examine two initial reactions that take place during the OH radical attack of the DNA base guanine: a ring opening reaction and a hydrogen transfer reaction. The same reactions are also studied in the presence of a single water molecule. The ring opening reaction has a moderate barrier height of ∼20-25 kcal/mol that is relatively insensitive to the presence of water. The barrier of the H-transfer reaction, on the other hand, is lowered from ∼50 to ∼22 kcal/mol when one water molecule is added, thus becoming comparable to the barrier height of the ring opening reaction.
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