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Updated: Apr 19, 2026

Using Human Differentially Expressed Gene Lists to Perform Downstream Pathway Enrichment Analysis and Target Prioritization
Published on: October 3, 2025
Detecting differential patterns of interaction in molecular pathways
Masanao Yajima1, Donatello Telesca2, Yuan Ji3
1Fred Hutchinson Cancer Research Center, WA 98109, USA myajima@fredhutch.org.
Abstract:
We consider statistical inference for potentially heterogeneous patterns of association characterizing the expression of bio-molecular pathways across different biologic conditions. We discuss a modeling approach based on Gaussian-directed acyclic graphs and provide computational and methodological details needed for posterior inference. Our application finds motivation in reverse phase protein array data from a study on acute myeloid leukemia, where interest centers on contrasting refractory versus relapsed patients. We illustrate the proposed method through both synthetic and case study data.
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