Related Experiment Video
Updated: Apr 19, 2026

Genotyping of Staphylococcus aureus by Ribosomal Spacer PCR RS-PCR
Published on: November 4, 2016
Prevalence and characterization of methicillin susceptible Staphylococcus aureus ST398 isolates from retail foods
Guanghui Li1, Congming Wu2, Xin Wang1
1College of Food Science and Engineering, Northwest A&F University, Yangling, Shaanxi 712100, China.
Abstract:
In this study, we explored the prevalence of Staphylococcus aureus (S. aureus) ST398 in retail foods and then investigated for their virulence and antimicrobial resistance genetic background. Fourteen out of 5103 (0.27%) samples were positive for methicillin susceptible S. aureus (MSSA) ST398. Resistance was most frequently observed to penicillin (PEN) (100%), followed by trimethoprim (TMP), erythromycin (ERY) and ampicillin (AMP) (each 86.7%), clindamycin (CLD, 80.0%), and tetracycline (TET, 26.7%). All ST398 isolates were susceptible to amikacin, chloramphenicol, cefoxitin, gentamicin, oxacillin, and vancomycin. Two predominant resistance patterns including TMP-ERY-CLD-PEN-AMP (60.0%) and TMP-ERY-TET-CLD-PEN-AMP (20.0%) were identified. Isolates harbored blaZ (86.7%) gene, followed by tet(L) and linA/linA' (each 46.7%), ermB and msrA (each 33.3%), aph(3')-IIIa and dfrK (each 26.7%), tet(K) (20.0%), ant(4')-Ia, ermA and emrC (each 13.3%) and cat::pC221 (6.7%). No isolate carried mecA, tet(M), tet(O), fexA, aac(6')/aph(2″), cfr, ermT, msrB, cat::pC194, cat::pC223, catpIp-501, dfrD, dfrG and dfrS1 genes. For virulence genes, hld (73.3%), seb and sed (each 66.7%), hla (60.0%), lukPV (33.3%), sej (26.7%), lukED and seg (each 3.3%) were detected. None of isolates contained sea, sec, see, seh, sei, tst, eta, etb, sek-ser, seu, lukM, hlg, and hlgv genes. Four spa types were found, including t571 (6/15), t034 (4/15), t2876 (3/15) and t1250 (2/15). All strains were non-typeable for agr locus. Our findings indicated that MSSA ST398 isolates had a low prevalence rate in retail foods, and these isolates harbored multiple virulence and antimicrobial resistance genes, and exhibited multiple antimicrobial resistance. Further studies are required to elucidate the possible role of MSSA ST398 as a source of human infection.
Insights
Methicillin-susceptible Staphylococcus aureus (MSSA) ST398 showed low prevalence in retail foods. These MSSA ST398 isolates carried multiple virulence and antimicrobial resistance genes, highlighting potential human infection risks.
Area of Science:
- Food Microbiology
- Antimicrobial Resistance
- Bacterial Pathogenesis
Background:
- Staphylococcus aureus ST398 is a significant livestock-associated lineage.
- Understanding its presence in the food chain is crucial for public health.
- Retail foods can serve as a potential vehicle for pathogen transmission.
Purpose of the Study:
- To determine the prevalence of Staphylococcus aureus ST398 in retail food products.
- To characterize the antimicrobial resistance and virulence gene profiles of detected isolates.
- To assess the genetic background of MSSA ST398 in the food supply.
Main Methods:
- Food samples were screened for the presence of methicillin-susceptible S. aureus (MSSA) ST398.
- Antimicrobial susceptibility testing was performed using a panel of antibiotics.
- PCR was employed to detect specific antimicrobial resistance and virulence genes.
- spa typing was conducted to determine the genetic relatedness of isolates.
Main Results:
- MSSA ST398 was detected in 0.27% of retail food samples.
- High resistance rates were observed for penicillin, trimethoprim, erythromycin, ampicillin, and clindamycin.
- Various antimicrobial resistance genes (e.g., blaZ, tet(L), linA) and virulence genes (e.g., hld, seb, hla) were identified.
- Four distinct spa types (t571, t034, t2876, t1250) were identified among the isolates.
Conclusions:
- MSSA ST398 exhibits low prevalence in retail foods but possesses concerning antimicrobial resistance and virulence factors.
- The genetic makeup of these isolates suggests a potential role in human infections.
- Further research is warranted to fully understand the One Health implications of MSSA ST398 in the food chain.
Related Concept Videos
Clinical Significance of Antibiotic Resistance
Staphylococcal Skin Infections
Mechanism of Antibiotic Resistance in MRSA
Microbes in Food Production

