Related Experiment Video
Updated: Apr 18, 2026

Infinium Assay for Large-scale SNP Genotyping Applications
Published on: November 19, 2013
Testing for clustering at many ranges inflates family-wise error rate (FWE)
Matthew Shane Loop1, Leslie A McClure
1Department of Biostatistics, University of Alabama at Birmingham, 1665 University Boulevard, RPHB 327, 35294 Birmingham, Alabama, USA. loop2@uab.edu.
Background:
Testing for clustering at multiple ranges within a single dataset is a common practice in spatial epidemiology. It is not documented whether this approach has an impact on the type 1 error rate.
Methods:
We estimated the family-wise error rate (FWE) for the difference in Ripley's K functions test, when testing at an increasing number of ranges at an alpha-level of 0.05. Case and control locations were generated from a Cox process on a square area the size of the continental US (≈3,000,000 mi2). Two thousand Monte Carlo replicates were used to estimate the FWE with 95% confidence intervals when testing for clustering at one range, as well as 10, 50, and 100 equidistant ranges.
Results:
The estimated FWE and 95% confidence intervals when testing 10, 50, and 100 ranges were 0.22 (0.20 - 0.24), 0.34 (0.31 - 0.36), and 0.36 (0.34 - 0.38), respectively.
Conclusions:
Testing for clustering at multiple ranges within a single dataset inflated the FWE above the nominal level of 0.05. Investigators should construct simultaneous critical envelopes (available in spatstat package in R), or use a test statistic that integrates the test statistics from each range, as suggested by the creators of the difference in Ripley's K functions test.
Related Concept Videos
Cluster Sampling Method
To choose a cluster sample, divide the population into clusters (groups) and then randomly select some of the clusters. All the members from these clusters are in the cluster sample. For example, if you randomly sample four departments from your...
Expected Frequencies in Goodness-of-Fit Tests
Random Error
Random and Systematic Errors
Random and Systematic Errors
Bonferroni Test
The means of different samples are first paired in all possible combinations.
The null hypothesis of the...

