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A model for the complex between the helix destabilizing protein GP32 of bacteriophage T4 and single-stranded DNA
M A Scheerhagen1, M E Kuil, H van Amerongen
1Department of Biophysics, Free University Amsterdam, The Netherlands.
Abstract:
A model for the structure of the complex between the helix-destabilizing protein of bacteriophage T4, GP32, and single-stranded DNA is proposed. In this model the bases are arranged in a helix, that is characterized by a relatively large distance between successive bases, a substantial base tilt, in combination with a small rotation per base. This helix is further organized into a tertiary structure, possibly a superhelix, of which the corresponding protein shell corresponds to the relatively rigid and rod-like structure that is observed in hydrodynamic experiments. It is proposed that similar structural features apply to other single-stranded DNA binding proteins in complex with polynucleotides.