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Co-immunoprecipitation Assay Using Endogenous Nuclear Proteins from Cells Cultured Under Hypoxic Conditions
Published on: August 2, 2018
An internal ribosome entry site in the 5' untranslated region of epidermal growth factor receptor allows hypoxic
T E Webb1, A Hughes1, D S Smalley1
1School of Pharmacy, University of Nottingham, Nottingham, UK.
Abstract:
The expression of epidermal growth factor receptor (EGFR/ERBB1/HER1) is implicated in the progress of numerous cancers, a feature that has been exploited in the development of EGFR antibodies and EGFR tyrosine kinase inhibitors as anti-cancer drugs. However, EGFR also has important normal cellular functions, leading to serious side effects when EGFR is inhibited. One damaging characteristic of many oncogenes is the ability to be expressed in the hypoxic conditions associated with the tumour interior. It has previously been demonstrated that expression of EGFR is maintained in hypoxic conditions via an unknown mechanism of translational control, despite global translation rates generally being attenuated under hypoxic conditions. In this report, we demonstrate that the human EGFR 5' untranslated region (UTR) sequence can initiate the expression of a downstream open reading frame via an internal ribosome entry site (IRES). We show that this effect is not due to either cryptic promoter activity or splicing events. We have investigated the requirement of the EGFR IRES for eukaryotic initiation factor 4A (eIF4A), which is an RNA helicase responsible for processing RNA secondary structure as part of translation initiation. Treatment with hippuristanol (a potent inhibitor of eIF4A) caused a decrease in EGFR 5' UTR-driven reporter activity and also a reduction in EGFR protein level. Importantly, we show that expression of a reporter gene under the control of the EGFR IRES is maintained under hypoxic conditions despite a fall in global translation rates.
Insights
The epidermal growth factor receptor (EGFR) 5' untranslated region initiates translation via an internal ribosome entry site (IRES). This mechanism sustains EGFR expression under hypoxic conditions, crucial for cancer development.
Area of Science:
- Molecular Biology
- Cancer Research
- Translational Control
Background:
- Epidermal growth factor receptor (EGFR) expression drives cancer progression and is targeted by anti-cancer drugs.
- EGFR inhibition causes side effects due to its normal cellular functions.
- Oncogenes, including EGFR, are often expressed in hypoxic tumor interiors via unknown translational control mechanisms.
Purpose of the Study:
- To elucidate the mechanism maintaining EGFR expression under hypoxia.
- To investigate the role of the EGFR 5' untranslated region (UTR) in translational control.
- To identify factors involved in EGFR translational regulation under hypoxic conditions.
Main Methods:
- Utilized reporter gene assays to assess EGFR 5' UTR activity.
- Investigated internal ribosome entry site (IRES) activity within the EGFR 5' UTR.
- Examined the role of eukaryotic initiation factor 4A (eIF4A) using the inhibitor hippuristanol.
- Assessed protein expression levels under varying conditions, including hypoxia.
Main Results:
- Demonstrated that the human EGFR 5' UTR can initiate downstream open reading frame expression via an internal ribosome entry site (IRES).
- Ruled out cryptic promoter activity or splicing as causes for this initiation.
- Showed that hippuristanol, an eIF4A inhibitor, reduced EGFR 5' UTR-driven reporter activity and EGFR protein levels.
- Confirmed that EGFR IRES-driven reporter gene expression is maintained under hypoxia despite decreased global translation.
Conclusions:
- The EGFR 5' UTR contains a functional internal ribosome entry site (IRES) that drives translation initiation.
- This EGFR IRES-mediated translation is dependent on eukaryotic initiation factor 4A (eIF4A).
- The EGFR IRES provides a mechanism for sustained EGFR expression in hypoxic tumor environments, contributing to cancer progression.
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