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Updated: Apr 18, 2026

Visualization of DNA Repair Proteins Interaction by Immunofluorescence
Published on: June 26, 2020
Functional regulation of the DNA damage-recognition factor DDB2 by ubiquitination and interaction with xeroderma
Syota Matsumoto1, Eric S Fischer2, Takeshi Yasuda3
1Biosignal Research Center, Organization of Advanced Science and Technology, Kobe University, Kobe 657-8501, Japan Graduate School of Science, Kobe University, Kobe 657-8501, Japan.
Abstract:
In mammalian nucleotide excision repair, the DDB1-DDB2 complex recognizes UV-induced DNA photolesions and facilitates recruitment of the XPC complex. Upon binding to damaged DNA, the Cullin 4 ubiquitin ligase associated with DDB1-DDB2 is activated and ubiquitinates DDB2 and XPC. The structurally disordered N-terminal tail of DDB2 contains seven lysines identified as major sites for ubiquitination that target the protein for proteasomal degradation; however, the precise biological functions of these modifications remained unknown. By exogenous expression of mutant DDB2 proteins in normal human fibroblasts, here we show that the N-terminal tail of DDB2 is involved in regulation of cellular responses to UV. By striking contrast with behaviors of exogenous DDB2, the endogenous DDB2 protein was stabilized even after UV irradiation as a function of the XPC expression level. Furthermore, XPC competitively suppressed ubiquitination of DDB2 in vitro, and this effect was significantly promoted by centrin-2, which augments the DNA damage-recognition activity of XPC. Based on these findings, we propose that in cells exposed to UV, DDB2 is protected by XPC from ubiquitination and degradation in a stochastic manner; thus XPC allows DDB2 to initiate multiple rounds of repair events, thereby contributing to the persistence of cellular DNA repair capacity.
Insights
UV-induced DNA damage repair involves DDB2 stabilization by XPC. This interaction protects DDB2 from degradation, allowing sustained DNA repair capacity after UV exposure.
Area of Science:
- Molecular Biology
- DNA Repair Mechanisms
- Cellular Response to UV Radiation
Background:
- The DDB1-DDB2 complex identifies UV DNA damage, recruiting the XPC complex for mammalian nucleotide excision repair.
- Ubiquitination of DDB2 and XPC by the Cullin 4 ubiquitin ligase is triggered upon DNA damage binding.
- The biological roles of DDB2 ubiquitination sites on its N-terminal tail were previously unclear.
Purpose of the Study:
- To investigate the function of the DDB2 N-terminal tail in cellular responses to UV radiation.
- To elucidate the regulatory relationship between DDB2, XPC, and ubiquitination in DNA repair.
- To understand how DDB2 protein stability influences DNA repair capacity post-UV irradiation.
Main Methods:
- Exogenous expression of mutant DDB2 proteins in human fibroblasts.
- Analysis of endogenous DDB2 protein stability in relation to XPC expression levels after UV irradiation.
- In vitro ubiquitination assays to assess the effect of XPC and centrin-2 on DDB2 ubiquitination.
Main Results:
- The N-terminal tail of DDB2 plays a role in regulating cellular UV responses.
- Endogenous DDB2 protein stability increases with XPC levels post-UV irradiation, contrasting with exogenous DDB2 behavior.
- XPC competitively inhibits DDB2 ubiquitination in vitro, an effect enhanced by centrin-2.
Conclusions:
- XPC protects DDB2 from ubiquitination and proteasomal degradation in UV-exposed cells.
- This protection by XPC allows DDB2 to participate in multiple repair events, ensuring persistent DNA repair capacity.
- The findings reveal a mechanism for regulating DDB2 function and maintaining cellular resilience to UV damage.
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